| Protein: | GAA1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 614 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GAA1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..614] | [1..614] |
|
|
0.0 | [1..603] | [1..648] |
|
|
0.0 | [1..481] | [1..530] |
|
|
0.0 | [1..481] | [1..530] |
|
|
0.0 | [12..485] | [7..493] |
|
|
0.0 | [9..442] | [291..758] |
|
Region A: Residues: [1-309] |
1 11 21 31 41 51
| | | | | |
1 MALLEKLHRR IVDMGLVPRI IALLPVISML CALFGFISIA ILPMDGQYRR TYISENALMP 60
61 SQAYSYFRES EWNILRGYRS QIKEMVNMTS MERNNLMGSW LQEFGTKTAI YENEQYGETL 120
121 YGVMHAPRGD GTEAMVLAVP WFNSDDEFNI GGAALGVSLA RFFSRWPVWS KNIIVVFSEN 180
181 PRAALRSWVE AYHTSLDLTG GSIEAAVVLD YSSTEDFFEY VEISYDGLNG ELPNLDLVNI 240
241 AISITEHEGM KVSLHGLPSD QLTNNNFWSR LKILCLGIRD WALSGVKKPH GNEAFSGWRI 300
301 QSVTLKAHG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| hydrolase activity | 1.72000211894151 | bayes_pls_golite062009 |
| catalytic activity | 1.30073863026596 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 1.04545175523841 | bayes_pls_golite062009 |
| binding | 0.768831715417683 | bayes_pls_golite062009 |
| peptidase activity | 0.700635398774672 | bayes_pls_golite062009 |
| nucleic acid binding | 0.362145256746391 | bayes_pls_golite062009 |
| metallopeptidase activity | 0.177551285129758 | bayes_pls_golite062009 |
| transcription regulator activity | 0.171364523459 | bayes_pls_golite062009 |
| DNA binding | 0.0535456396545306 | bayes_pls_golite062009 |
|
Region A: Residues: [310-502] |
1 11 21 31 41 51
| | | | | |
1 NSGHDITTFG RIPEAMFRSI NNLLEKFHQS FFFYLLLAPR QFVSISSYLP SAVALSIAFA 60
61 ISSLNAFINN AYANISLFSE YNLVALLVWF VSLVISFVVS QAFLLIPSSG LLMTISMASC 120
121 FLPLILSRKI HISEPLSYRL KNVAFLYFSL VSTSLLMINF AMALLIGTLA FPMTFVKTIV 180
181 ESSSEHEVTT QSS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [503-614] |
1 11 21 31 41 51
| | | | | |
1 NPIKTEPKDE IELVENHMDT TPATPQQQKQ KLKNLVLLIL TNPFISITLF GLFFDDEFHG 60
61 FDIINKLVSA WLDLKCWSWF VLCIGWLPCW LLILASSFES KSVVVRSKEK QS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
