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View Structure Prediction Details

Protein: ATP7
Organism: Saccharomyces cerevisiae
Length: 174 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATP7.

Description E-value Query
Range		 Subject
Range
ATP7_KLULA - ATP synthase subunit d, mitochondrial OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 707...
ATP7_KLULA - ATP synthase subunit d, mitochondrial OS=Kluyveromyces lactis GN=ATP7 PE=3 SV=4
 2.0E-54 [1..174] [1..174]
ATP7_YEAST - ATP synthase subunit d, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AT...
ATP7 - Subunit d of the stator stalk of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily c...
 2.0E-54 [1..174] [1..174]
gi|114670390 - gi|114670390|ref|XP_001138674.1| PREDICTED: ATP synthase, H+ transporting, mitochondrial F0 complex,...
ATP5H - ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d
 1.0E-52 [1..147] [1..144]
ATP5H_MOUSE - ATP synthase subunit d, mitochondrial OS=Mus musculus GN=Atp5h PE=1 SV=3
 1.0E-51 [1..147] [1..144]
ATP5H_RAT - ATP synthase subunit d, mitochondrial OS=Rattus norvegicus GN=Atp5h PE=1 SV=3
 1.0E-51 [1..147] [1..144]
ATP5H_BOVIN - ATP synthase subunit d, mitochondrial OS=Bos taurus GN=ATP5H PE=1 SV=2
 4.0E-51 [1..147] [1..144]
ATP7_SCHPO - ATP synthase subunit d, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=atp7...
atp7 - F0-ATPase subunit D
 3.0E-48 [1..174] [1..175]
ATPsyn-d-PA, ATP... - The gene ATP synthase, subunit d is referred to in FlyBase by the symbol Dmel\ATPsyn-d (CG6030, FBgn...
gi|220949374, gi... - gi|220958584|gb|ACL91835.1| ATPsyn-d-PA [synthetic construct], gi|220949374|gb|ACL87230.1| ATPsyn-d-...
 1.0E-41 [1..145] [1..142]

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Predicted Domain #1
Region A:
Residues: [1-101] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLAKSAANK LDWAKVISSL RITGSTATQL SSFKKRNDEA RRQLLELQSQ PTEVDFSHYR  60
   61 SVLKNTSVID KIESYVKQYK PVKIDASKQL QVIESFEKHA M

[Run NCBI BLAST on this sequence.]

Detection Method: Pcons
Confidence: 1.68
Match: 2tmaB
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrogen ion transmembrane transporter activity 10.7183160834782 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 8.97596713760839 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 7.90597892679083 bayes_pls_golite062009
hydrogen-exporting ATPase activity, phosphorylative mechanism 6.1125687610116 bayes_pls_golite062009
cation transmembrane transporter activity 4.22395118867988 bayes_pls_golite062009
ion transmembrane transporter activity 4.14778831333857 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 3.77987144158593 bayes_pls_golite062009
transporter activity 2.17343635031853 bayes_pls_golite062009
transmembrane transporter activity 2.0392528625188 bayes_pls_golite062009
substrate-specific transporter activity 1.96541207125766 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism 1.93539847256373 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of ions 1.72052571762598 bayes_pls_golite062009
nucleoside-triphosphatase activity 1.46705756526037 bayes_pls_golite062009
pyrophosphatase activity 1.40154328896132 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 1.38474091052441 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 1.38237845949685 bayes_pls_golite062009
ATPase activity 1.3807805914732 bayes_pls_golite062009
primary active transmembrane transporter activity 0.799499441674651 bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity 0.793051451246261 bayes_pls_golite062009
active transmembrane transporter activity 0.769001631826172 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances 0.763828049556794 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of substances 0.760339273021048 bayes_pls_golite062009
ATPase activity, coupled to movement of substances 0.760299009322944 bayes_pls_golite062009
catalytic activity 0.534516847146079 bayes_pls_golite062009
hydrolase activity 0.463638383758448 bayes_pls_golite062009
ATPase activity, coupled 0.334578049419841 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [102-174] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TNAKETESLV SKELKDLQST LDNIQSARPF DELTVDDLTK IKPEIDAKVE EMVKKGKWDV  60
   61 PGYKDRFGNL NVM

[Run NCBI BLAST on this sequence.]

Detection Method: Pcons
Confidence: 1.68
Match: 2tmaB
Description: Tropomyosin
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle