| Protein: | YHC3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 408 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YHC3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..408] | [1..408] |
|
|
0.0 | [12..395] | [41..436] |
|
|
0.0 | [12..395] | [41..436] |
|
|
0.0 | [12..395] | [41..436] |
|
|
0.0 | [12..378] | [41..419] |
|
|
0.0 | [11..398] | [12..421] |
|
Region A: Residues: [1-408] |
1 11 21 31 41 51
| | | | | |
1 MSDKSHQIYC YFWLFGLINN VLYVVILSAA VDIVGPTLPK SLVLLADIFP SLAIKLCSPF 60
61 FIDRIKYSYR IWSLITMSCL GMFLVSFKNL FVCLLGISFA SISSGFGEVT FLQLTHYYKQ 120
121 ISLNGWSSGT GGAGIIGGAS YMFLTSIFKV PVKLTLLVFS LLPFAFLFYF KLESNDTNLT 180
181 YQSLQQIDEA EDDQLVPFPV AFTHTNASQS LYSTRQHILQ TVKRLRRLVF PYMVPLTTVY 240
241 LFEYLINQAV APTLLFPING DERSKSMPFF FHKYRDIYVT YGTLYQLGVF ISRSFGHLMR 300
301 MRSLYILAFL QGVNLCITVL QSWFYVTHSP WAVMILIFYE GFLGGASYVN TFLNILEQED 360
361 PDETEFAMGA VSIADSFGVF LAALLGLGLE PKLCRHQIAD DRPWCRME
|
| Detection Method: |  |
| Confidence: | 269.721246 |
| Match: | PF02487 |
| Description: | CLN3 protein |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| transporter activity | 3.82096685159505 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.34396155292818 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.32643461660963 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.2506965512085 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.05049771748124 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.02370427376594 | bayes_pls_golite062009 |
| binding | 1.9065830290222 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.62538016506437 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.46819549608723 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 0.869150152038001 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.339747214378126 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.339747214378126 | bayes_pls_golite062009 |
| symporter activity | 0.327558013224678 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.327558013224678 | bayes_pls_golite062009 |
| hexose phosphate transmembrane transporter activity | 0.273403673499648 | bayes_pls_golite062009 |
| glucose-6-phosphate transmembrane transporter activity | 0.273403673499648 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.222664452597504 | bayes_pls_golite062009 |
