Protein: | NUP159 |
Organism: | Saccharomyces cerevisiae |
Length: | 1460 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NUP159.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..1460] | [1..1460] |
|
7.0E-78 | [57..1328] | [1071..2356] |
|
2.0E-64 | [149..1278] | [14..1123] |
|
1.0E-60 | [159..1204] | [16..1041] |
|
1.0E-58 | [381..1179] | [22..833] |
Region A: Residues: [1-132] |
1 11 21 31 41 51 | | | | | | 1 MSSLKDEVPT ETSEDFGFKF LGQKQILPSF NEKLPFASLQ NLDISNSKSL FVAASGSKAV 60 61 VGELQLLRDH ITSDSTPLTF KWEKEIPDVI FVCFHGDQVL VSTRNALYSL DLEELSEFRT 120 121 VTSFEKPVFQ LK |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Term | Confidence | Notes |
nucleocytoplasmic transporter activity | 7.36869426424539 | bayes_pls_golite062009 |
transporter activity | 2.55928656852707 | bayes_pls_golite062009 |
binding | 1.85720332251545 | bayes_pls_golite062009 |
structural molecule activity | 1.15400876251633 | bayes_pls_golite062009 |
protein binding | 0.756333887228113 | bayes_pls_golite062009 |
Region A: Residues: [133-609] |
1 11 21 31 41 51 | | | | | | 1 NVNNTLVILN SVNDLSALDL RTKSTKQLAQ NVTSFDVTNS QLAVLLKDRS FQSFAWRNGE 60 61 MEKQFEFSLP SELEELPVEE YSPLSVTILS PQDFLAVFGN VISETDDEVS YDQKMYIIKH 120 121 IDGSASFQET FDITPPFGQI VRFPYMYKVT LSGLIEPDAN VNVLASSCSS EVSIWDSKQV 180 181 IEPSQDSERA VLPISEETDK DTNPIGVAVD VVTSGTILEP CSGVDTIERL PLVYILNNEG 240 241 SLQIVGLFHV AAIKSGHYSI NLESLEHEKS LSPTSEKIPI AGQEQEEKKK NNESSKALSE 300 301 NPFTSANTSG FTFLKTQPAA ANSLQSQSSS TFGAPSFGSS AFKIDLPSVS STSTGVASSE 360 361 QDATDPASAK PVFGKPAFGA IAKEPSTSEY AFGKPSFGAP SFGSGKSSVE SPASGSAFGK 420 421 PSFGTPSFGS GNSSVEPPAS GSAFGKPSFG TPSFGSGNSS AEPPASGSAF GKPSFGT |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [610-935] |
1 11 21 31 41 51 | | | | | | 1 SAFGTASSNE TNSGSIFGKA AFGSSSFAPA NNELFGSNFT ISKPTVDSPK EVDSTSPFPS 60 61 SGDQSEDESK SDVDSSSTPF GTKPNTSTKP KTNAFDFGSS SFGSGFSKAL ESVGSDTTFK 120 121 FGTQASPFSS QLGNKSPFSS FTKDDTENGS LSKGSTSEIN DDNEEHESNG PNVSGNDLTD 180 181 STVEQTSSTR LPETPSDEDG EVVEEEAQKS PIGKLTETIK KSANIDMAGL KNPVFGNHVK 240 241 AKSESPFSAF ATNITKPSST TPAFSFGNST MNKSNTSTVS PMEEADTKET SEKGPITLKS 300 301 VENPFLPAKE ERTGESSKKD HNDDPK |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [936-1376] |
1 11 21 31 41 51 | | | | | | 1 DGYVSGSEIS VRTSESAFDT TANEEIPKSQ DVNNHEKSET DPKYSQHAVV DHDNKSKEMN 60 61 ETSKNNERSG QPNHGVQGDG IALKKDNEKE NFDSNMAIKQ FEDHQSSEED ASEKDSRQSS 120 121 EVKESDDNMS LNSDRDESIS ESYDKLEDIN TDELPHGGEA FKAREVSASA DFDVQTSLED 180 181 NYAESGIQTD LSESSKENEV QTDAIPVKHN STQTVKKEAV DNGLQTEPVE TCNFSVQTFE 240 241 GDENYLAEQC KPKQLKEYYT SAKVSNIPFV SQNSTLRLIE STFQTVEAEF TVLMENIRNM 300 301 DTFFTDQSSI PLVKRTVRSI NNLYTWRIPE AEILLNIQNN IKCEQMQITN ANIQDLKEKV 360 361 TDYVRKDIAQ ITEDVANAKE EYLFLMHFDD ASSGYVKDLS THQFRMQKTL RQKLFDVSAK 420 421 INHTEELLNI LKLFTVKNKR L |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1377-1460] |
1 11 21 31 41 51 | | | | | | 1 DDNPLVAKLA KESLARDGLL KEIKLLREQV SRLQLEEKGK KASSFDASSS ITKDMKGFKV 60 61 VEVGLAMNTK KQIGDFFKNL NMAK |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.847 | 0.169 | nuclear pore organization | a.65.1 | Annexin |