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View Structure Prediction Details

Protein: YIL001W
Organism: Saccharomyces cerevisiae
Length: 513 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YIL001W.

Description E-value Query
Range
Subject
Range
gi|190406223 - gi|190406223|gb|EDV09490.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
YIL001W - Putative protein of unknown function; contains a BTB/POZ domain which generally function in protein ...
YIA1_YEAST - Ankyrin repeat-containing protein YIL001W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) G...
5.0E-89 [1..513] [1..513]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
2.0E-73 [13..512] [6..477]
ABTB1_MOUSE - Ankyrin repeat and BTB/POZ domain-containing protein 1 OS=Mus musculus GN=Abtb1 PE=2 SV=1
6.0E-72 [13..512] [6..477]
BTB3_SCHPO - BTB/POZ domain-containing protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=btb3 P...
btb3 - BTB /POZ domain protein Btb3
5.0E-71 [13..511] [56..521]
gi|119599741, gi... - gi|25777626|ref|NP_742025.1| ankyrin repeat and BTB (POZ) domain containing 1 isoform 3 [Homo sapien...
8.0E-64 [47..512] [16..452]
KLHDB_DROYA - Kelch-like protein diablo OS=Drosophila yakuba GN=dbo PE=3 SV=1
KLHDB_DROSE - Kelch-like protein diablo OS=Drosophila sechellia GN=dbo PE=3 SV=1
dbo-PA - The gene diablo is referred to in FlyBase by the symbol Dmel\dbo (CG6224, FBgn0040230). It is a prot...
8.0E-57 [252..494] [50..272]

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Predicted Domain #1
Region A:
Residues: [1-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADKLMDKNF EELCYSCRTG DMDNVDRLIS TGVNVNSVDK FDNSPLFLAS LCGHEAVVKL  60
   61 LLQRGAVCDR DRYEGARCIY GALTDTIRDT LLSY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.519517
Match: 1myo__
Description: Myotrophin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [95-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DISKAVDVKQ PFATHISSMY NDEGFLKRDI TFRVSNGKLF TAHKFLLCAR SEILAEKMVN  60
   61 EWAKHEIVSL EVRPDIFDIF LKFLYLIPIL HQIEPGQYEE LIELSSKFDI ELLPEFLDKA 120
  121 RHT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [218-391]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADPTEKSRLM SDYQYKFTEV ARSQLLIFVN NCIFRSTVDL ANSERRVFSL MNCPAYPDVQ  60
   61 LMVKNRNGAI RIYPCHLAVL SRAEYFKVMF TNNFKEKVTY IKAKHVTGKY NSIIPQLTLP 120
  121 NCEFEVAEII LRYLYADNTD IPWMYAVDVL LLADILLEDR LKTIASTIIT QSKE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.69897
Match: 1buoA_
Description: Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [392-513]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FIQQYNVFDV LYLSWEIGVE RLEQFAAKFI AIHLQELYKD PEIKRAIMLS SQRISLRQET  60
   61 DTIELVDDIR YYLLRKYSFE PDDVELFENQ DDLEYLKQVG YLEYRKDMGM LDNILADLEL 120
  121 DV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle