YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YHL050C
Organism: Saccharomyces cerevisiae
Length: 697 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YHL050C.

Description E-value Query
Range
Subject
Range
YHF0_YEAST - Uncharacterized protein YHL050C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHL050C ...
YHL050C - Putative protein of unknown function, potential Cdc28p substrate
0.0 [1..697] [1..697]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
0.0 [106..697] [653..1224]

Back

Predicted Domain #1
Region A:
Residues: [1-53]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADTPSVAVQ APPGYGKTEL FHLPLIALAS KGDVEYVSFL FVPYTVLLAN CMI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.395 0.599 helicase activity a.2.9 C-terminal UvrC-binding domain of UvrB
View Download 0.744 0.002 helicase activity a.8.1 Bacterial immunoglobulin/albumin-binding domains
View Download 0.425 0.001 helicase activity a.108.1 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
View Download 0.416 0.000 helicase activity a.32.1 Transcription factor IIA (TFIIA), alpha-helical domain
View Download 0.373 0.000 helicase activity a.159.1 Protein serine/threonine phosphatase 2C, C-terminal domain
View Download 0.293 N/A N/A f.13.1 Family A G protein-coupled receptor-like
View Download 0.292 N/A N/A a.23.5 Hemolysin expression modulating protein HHA
View Download 0.286 N/A N/A d.95.2 Homing endonucleases
View Download 0.279 N/A N/A a.2.10 Epsilon subunit of F1F0-ATP synthase C-terminal domain
View Download 0.279 N/A N/A d.58.1 4Fe-4S ferredoxins
View Download 0.265 N/A N/A a.164.1 C-terminal domain of DFF45/ICAD (DFF-C domain)
View Download 0.237 N/A N/A d.52.1 Alpha-lytic protease prodomain
View Download 0.229 N/A N/A a.30.2 Homodimeric domain of signal transducing histidine kinase
View Download 0.227 N/A N/A d.205.1 GTP cyclohydrolase I feedback regulatory protein, GFRP
View Download 0.219 N/A N/A a.126.1 Serum albumin-like
View Download 0.210 N/A N/A a.2.7 tRNA-binding arm
View Download 0.202 N/A N/A a.3.1 Cytochrome c
View Download 0.201 N/A N/A a.4.1 Homeodomain-like
View Download 0.200 N/A N/A a.24.13 Domain of the SRP/SRP receptor G-proteins

Predicted functions:

Term Confidence Notes
binding 0.301700930786307 bayes_pls_golite062009
catalytic activity 0.176212702885001 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [54-402]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RLGRCGCLNV APVRNFIEEG CDGVTDLYVG IYDDLASTNF TDRIAAWENI VECTFRTNNV  60
   61 KLGYLIVDEL HNFETEVYRQ SQFGGITNLD FDAFEKAIFL SGTAPEAVAD AALQRIGLTG 120
  121 LAKKSMDINE LKRSEDLSRG LSSYPTRMFN LIKEKSKVPL GTNATTTAST NVRTSATTTA 180
  181 SINVRTSATT TASINVRTSA TTTESTNSNT NATTTESTNS STNATTTAST NSSTNATTTE 240
  241 STNASAKEDA NKDGNAEDNR FHPVTDINKE PYKRKGSQMV LLERKKLKAQ FPNTSENMNV 300
  301 LQFLGFRSDE IKHLFLYGID IYFCPEGVFT QYGLCKGCQK MFELCVCWA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [403-697]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GQKVSYRRMA WEALAVERML RNDEEYKEYL EDIEPYHGDP VGYLKFFSVK RREIYSQIQR  60
   61 NYAWYLAITR RRETISVLDS TRGKQGSQVF RMSGRQIKEL YYKVWSNLRE SKTEVLQYFL 120
  121 NWDEKKCQEE WEAKDDTVFV EALEKVGVFQ RLRSMTSAGL QGPQYVKLQF SRHHRQLRSR 180
  181 YELSLGMHLR DQLALGVTPS KVPHWTAFLS MLIGLFYNKT FRQKLEYLLE QISEVWLLPH 240
  241 WLDLANVEVL AADNTRVPLY MLMVAVHKEL DSDDVPDGRF DIILLCRDSS REVGE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [604-697]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPHWTAFLSM LIGLFYNKTF RQKLEYLLEQ ISEVWLLPHW LDLANVEVLA ADNTRVPLYM  60
   61 LMVAVHKELD SDDVPDGRFD IILLCRDSSR EVGE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.544 d.87.1 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
View Download 0.525 a.1.1 Globin-like
View Download 0.520 a.118.8 TPR-like
View Download 0.517 a.91.1 Regulator of G-protein signalling, RGS
View Download 0.513 a.118.9 ENTH/VHS domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle