| Protein: | GLE2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 365 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLE2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [2..365] | [847..1191] |
|
|
0.0 | [3..363] | [1123..1464] |
|
Region A: Residues: [1-365] |
1 11 21 31 41 51
| | | | | |
1 MSFFNRSNTT SALGTSTAMA NEKDLANDIV INSPAEDSIS DIAFSPQQDF MFSASSWDGK 60
61 VRIWDVQNGV PQGRAQHESS SPVLCTRWSN DGTKVASGGC DNALKLYDIA SGQTQQIGMH 120
121 SAPIKVLRFV QCGPSNTECI VTGSWDKTIK YWDMRQPQPV STVMMPERVY SMDNKQSLLV 180
181 VATAERHIAI INLANPTTIF KATTSPLKWQ TRCVACYNEA DGYAIGSVEG RCSIRYIDDG 240
241 MQKKSGFSFK CHRQTNPNRA PGSNGQSLVY PVNSIAFHPL YGTFVTAGGD GTFNFWDKNQ 300
301 RHRLKGYPTL QASIPVCSFN RNGSVFAYAL SYDWHQGHMG NRPDYPNVIR LHATTDEEVK 360
361 EKKKR
|
| Detection Method: |  |
| Confidence: | 125.156545 |
| Match: | 1erjA_ |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| snoRNA binding | 3.44364487903281 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.1056443224755 | bayes_pls_golite062009 |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| 2.40807791198019 | bayes_pls_golite062009 | |
| actin binding | 2.27900251096697 | bayes_pls_golite062009 |
| tubulin binding | 2.01759734664395 | bayes_pls_golite062009 |
| microtubule binding | 1.98090681825586 | bayes_pls_golite062009 |
| transcription regulator activity | 1.95667720244696 | bayes_pls_golite062009 |
| nucleic acid binding | 1.90457914882449 | bayes_pls_golite062009 |
| transcription repressor activity | 1.6725482369574 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 1.59258100795958 | bayes_pls_golite062009 |
| RNA binding | 1.50295916950465 | bayes_pls_golite062009 |
| structural molecule activity | 1.47448876401574 | bayes_pls_golite062009 |
| DNA binding | 1.38475369554616 | bayes_pls_golite062009 |
| dynactin binding | 1.29574819250251 | bayes_pls_golite062009 |
| protein binding | 1.21879977456466 | bayes_pls_golite062009 |
| transporter activity | 1.21549336905926 | bayes_pls_golite062009 |
| protein transporter activity | 0.964340340346761 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.963909191437161 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.937944931047515 | bayes_pls_golite062009 |
| dynein binding | 0.92848877230786 | bayes_pls_golite062009 |
| transcription factor activity | 0.804334981068351 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.734793983890004 | bayes_pls_golite062009 |
| signal transducer activity | 0.577438981735303 | bayes_pls_golite062009 |
| molecular transducer activity | 0.577438981735303 | bayes_pls_golite062009 |
| actin filament binding | 0.554537899540618 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.535041400676017 | bayes_pls_golite062009 |
| transcription factor binding | 0.412844855996155 | bayes_pls_golite062009 |
| receptor activity | 0.322599767074871 | bayes_pls_golite062009 |
| ligase activity | 0.20682813699621 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.19391619547146 | bayes_pls_golite062009 |
| hydrolase activity | 0.181211933860468 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.168317261786777 | bayes_pls_golite062009 |
| histone binding | 0.166694897714113 | bayes_pls_golite062009 |
| kinase activity | 0.127621956173205 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.118975415284669 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.00585398682921312 | bayes_pls_golite062009 |
