| Protein: | SPS2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 502 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPS2.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-83 | [1..502] | [1..502] |
|
|
4.0E-53 | [49..437] | [7..390] |
|
|
1.0E-48 | [5..374] | [56..410] |
|
|
5.0E-48 | [5..374] | [56..410] |
|
|
8.0E-47 | [6..374] | [1..354] |
|
|
2.0E-44 | [13..391] | [472..840] |
|
Region A: Residues: [1-62] |
1 11 21 31 41 51
| | | | | |
1 MPIWKTQTFF TSISVIQIVN KETKVSTKKE KDSMLNQLNT ILRFLFLFLQ LIKSSAAVEP 60
61 NG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| receptor activity | 1.64987101746707 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.34503183418293 | bayes_pls_golite062009 |
| binding | 1.08525898490902 | bayes_pls_golite062009 |
| protein binding | 0.669091045213589 | bayes_pls_golite062009 |
| signal transducer activity | 0.499118819144462 | bayes_pls_golite062009 |
| molecular transducer activity | 0.499118819144462 | bayes_pls_golite062009 |
|
Region A: Residues: [63-134] |
1 11 21 31 41 51
| | | | | |
1 GPNILDHNIM LVNTNATIPK KEQTDFEVIS PTKQTQVDED CKKGLYHIEN AGNLIELQAK 60
61 CWKVVGNIEI SS
|
| Detection Method: | |
| Confidence: | 26.154902 |
| Match: | 1h6uA_ |
| Description: | Internalin H |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [135-450] |
1 11 21 31 41 51
| | | | | |
1 NYSGSLIDLG LIREIEGDLI IKNNKHIFRI QGYNLESLGK LELDSLTSFV SLDFPALKEV 60
61 ETVDWRVLPI LSSVVINGNI KKIKNIIISD TALTSIDYFN NVKKVDIFNI NNNRFLENLF 120
121 ASLESVTKQL TVHSNAKELE LDLSNLHTVE NMTIKDVSEI KLAKLSSVNS SLEFIENQFS 180
181 SLELPLLAKV QGTLGLIDNK NLKKLNFSNA TDIQGGLMIA NNTELAKIDF FPKLRQIGGA 240
241 IYFEGSFDKI DLPELKLVKG SAYIKSSSEE LNCEEFTSPK AGRSIIRGGK IECTSGMKSK 300
301 MLNVDEEGNV LGKQET
|
| Detection Method: | |
| Confidence: | 15.0 |
| Match: | 1jl5A_ |
| Description: | Leucine rich effector protein YopM |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [451-502] |
1 11 21 31 41 51
| | | | | |
1 DNDNGKKEKG KNGAKSQGSS KKMENSAPKN IFIDAFKMSV YAVFTVLFSI IF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
