| Protein: | SPS2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 502 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPS2.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-83 | [1..502] | [1..502] |
|
|
4.0E-53 | [49..437] | [7..390] |
|
|
1.0E-48 | [5..374] | [56..410] |
|
|
5.0E-48 | [5..374] | [56..410] |
|
|
8.0E-47 | [6..374] | [1..354] |
|
|
2.0E-44 | [13..391] | [472..840] |
|
Region A: Residues: [1-62] |
1 11 21 31 41 51
| | | | | |
1 MPIWKTQTFF TSISVIQIVN KETKVSTKKE KDSMLNQLNT ILRFLFLFLQ LIKSSAAVEP 60
61 NG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.597 | a.65.1 | Annexin |
| View | Download | 0.702 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.644 | a.2.7 | tRNA-binding arm |
| View | Download | 0.566 | a.30.1 | ROP protein |
| View | Download | 0.674 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.499 | a.30.1 | ROP protein |
| View | Download | 0.486 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.484 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.481 | a.17.1 | p8-MTCP1 |
| View | Download | 0.479 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.469 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.465 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.458 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.455 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.451 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.448 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.448 | a.17.1 | p8-MTCP1 |
| View | Download | 0.444 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.433 | a.17.1 | p8-MTCP1 |
| View | Download | 0.429 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.429 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.425 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.423 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.410 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.404 | a.2.9 | C-terminal UvrC-binding domain of UvrB |
| View | Download | 0.399 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.398 | a.30.1 | ROP protein |
| View | Download | 0.396 | a.17.1 | p8-MTCP1 |
| View | Download | 0.394 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.389 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.386 | a.17.1 | p8-MTCP1 |
| View | Download | 0.380 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.380 | a.2.7 | tRNA-binding arm |
| View | Download | 0.379 | a.2.3 | Chaperone J-domain |
| View | Download | 0.372 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.370 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.367 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.366 | a.30.1 | ROP protein |
| View | Download | 0.362 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.361 | a.2.7 | tRNA-binding arm |
| View | Download | 0.361 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.356 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.351 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.349 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.348 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.345 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.337 | a.30.1 | ROP protein |
| View | Download | 0.333 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.332 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.332 | a.17.1 | p8-MTCP1 |
| View | Download | 0.331 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.329 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.323 | a.2.7 | tRNA-binding arm |
| View | Download | 0.321 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.319 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.317 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.315 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.314 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.313 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.311 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.305 | a.77.1 | DEATH domain |
| View | Download | 0.303 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.302 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.301 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.300 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.298 | a.4.8 | Ribosomal protein S18 |
| View | Download | 0.298 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.297 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.297 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.290 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.284 | d.222.1 | YbaB-like |
| View | Download | 0.283 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.283 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.280 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.272 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.266 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.266 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.263 | a.2.3 | Chaperone J-domain |
| View | Download | 0.260 | a.3.1 | Cytochrome c |
| View | Download | 0.257 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.253 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.251 | a.2.3 | Chaperone J-domain |
| View | Download | 0.248 | g.57.1 | Serine proteinase inhibitor lekti |
| View | Download | 0.247 | a.2.1 | GreA transcript cleavage protein, N-terminal domain |
| View | Download | 0.243 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.243 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.241 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.241 | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.240 | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.227 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.225 | a.65.1 | Annexin |
| View | Download | 0.223 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.222 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.221 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.216 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.215 | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.208 | a.4.1 | Homeodomain-like |
| View | Download | 0.207 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.207 | a.4.1 | Homeodomain-like |
| View | Download | 0.206 | f.30.1 | Photosystem I reaction center subunit X, PsaK |
| View | Download | 0.206 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.204 | a.64.1 | Saposin |
| View | Download | 0.204 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.204 | a.4.5 | "Winged helix" DNA-binding domain |
| Term | Confidence | Notes |
| receptor activity | 1.64987101746707 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.34503183418293 | bayes_pls_golite062009 |
| binding | 1.08525898490902 | bayes_pls_golite062009 |
| protein binding | 0.669091045213589 | bayes_pls_golite062009 |
| signal transducer activity | 0.499118819144462 | bayes_pls_golite062009 |
| molecular transducer activity | 0.499118819144462 | bayes_pls_golite062009 |
|
Region A: Residues: [63-134] |
1 11 21 31 41 51
| | | | | |
1 GPNILDHNIM LVNTNATIPK KEQTDFEVIS PTKQTQVDED CKKGLYHIEN AGNLIELQAK 60
61 CWKVVGNIEI SS
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| Detection Method: | |
| Confidence: | 26.154902 |
| Match: | 1h6uA_ |
| Description: | Internalin H |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [135-450] |
1 11 21 31 41 51
| | | | | |
1 NYSGSLIDLG LIREIEGDLI IKNNKHIFRI QGYNLESLGK LELDSLTSFV SLDFPALKEV 60
61 ETVDWRVLPI LSSVVINGNI KKIKNIIISD TALTSIDYFN NVKKVDIFNI NNNRFLENLF 120
121 ASLESVTKQL TVHSNAKELE LDLSNLHTVE NMTIKDVSEI KLAKLSSVNS SLEFIENQFS 180
181 SLELPLLAKV QGTLGLIDNK NLKKLNFSNA TDIQGGLMIA NNTELAKIDF FPKLRQIGGA 240
241 IYFEGSFDKI DLPELKLVKG SAYIKSSSEE LNCEEFTSPK AGRSIIRGGK IECTSGMKSK 300
301 MLNVDEEGNV LGKQET
|
| Detection Method: | |
| Confidence: | 15.0 |
| Match: | 1jl5A_ |
| Description: | Leucine rich effector protein YopM |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [451-502] |
1 11 21 31 41 51
| | | | | |
1 DNDNGKKEKG KNGAKSQGSS KKMENSAPKN IFIDAFKMSV YAVFTVLFSI IF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
