| Protein: | PPM1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 328 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PPM1.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-98 | [1..328] | [1..328] |
|
|
1.0E-82 | [2..326] | [10..307] |
|
|
1.0E-81 | [2..326] | [23..320] |
|
|
6.0E-75 | [4..326] | [10..303] |
|
|
1.0E-73 | [2..326] | [13..318] |
|
Region A: Residues: [1-256] |
1 11 21 31 41 51
| | | | | |
1 MERIIQQTDY DALSCKLAAI SVGYLPSSGL QRLSVDLSKK YTEWHRSYLI TLKKFSRRAF 60
61 GKVDKAMRSS FPVMNYGTYL RTVGIDAAIL EFLVANEKVQ VVNLGCGSDL RMLPLLQMFP 120
121 HLAYVDIDYN ESVELKNSIL RESEILRISL GLSKEDTAKS PFLIDQGRYK LAACDLNDIT 180
181 ETTRLLDVCT KREIPTIVIS ECLLCYMHNN ESQLLINTIM SKFSHGLWIS YDPIGGSQPN 240
241 DRFGAIMQSN LKESRN
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| protein methyltransferase activity | 4.65643463984431 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 4.4632173842967 | bayes_pls_golite062009 |
| methyltransferase activity | 4.15445027778357 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 4.07153733729662 | bayes_pls_golite062009 |
| N-methyltransferase activity | 3.67177992319602 | bayes_pls_golite062009 |
| histone methyltransferase activity | 3.4768933204909 | bayes_pls_golite062009 |
| arginine N-methyltransferase activity | 2.91440420216458 | bayes_pls_golite062009 |
| protein-arginine N-methyltransferase activity | 2.91440420216458 | bayes_pls_golite062009 |
| histone-arginine N-methyltransferase activity | 2.45397942930513 | bayes_pls_golite062009 |
| transferase activity | 2.22303238506686 | bayes_pls_golite062009 |
| protein-arginine omega-N monomethyltransferase activity | 2.07640017323617 | bayes_pls_golite062009 |
| DNA-methyltransferase activity | 1.63765148226572 | bayes_pls_golite062009 |
| histone methyltransferase activity (H4-R3 specific) | 1.52139371235933 | bayes_pls_golite062009 |
| protein-arginine omega-N asymmetric methyltransferase activity | 1.40758086578142 | bayes_pls_golite062009 |
| catalytic activity | 1.25333584501255 | bayes_pls_golite062009 |
| RNA methyltransferase activity | 0.817509452491588 | bayes_pls_golite062009 |
| site-specific DNA-methyltransferase (adenine-specific) activity | 0.703178429468566 | bayes_pls_golite062009 |
| binding | 0.348263200169904 | bayes_pls_golite062009 |
| protein-arginine omega-N symmetric methyltransferase activity | 0.328046788565125 | bayes_pls_golite062009 |
| rRNA methyltransferase activity | 0.230719796976667 | bayes_pls_golite062009 |
|
Region A: Residues: [257-328] |
1 11 21 31 41 51
| | | | | |
1 LEMPTLMTYN SKEKYASRWS AAPNVIVNDM WEIFNAQIPE SERKRLRSLQ FLDELEELKV 60
61 MQTHYILMKA QW
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.624 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.589 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.583 | a.77.1 | DEATH domain |
| View | Download | 0.425 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.392 | a.2.1 | GreA transcript cleavage protein, N-terminal domain |
| View | Download | 0.386 | a.2.3 | Chaperone J-domain |
| View | Download | 0.375 | a.64.1 | Saposin |
| View | Download | 0.370 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.362 | a.17.1 | p8-MTCP1 |
| View | Download | 0.359 | a.28.2 | Colicin E immunity proteins |
| View | Download | 0.336 | a.4.1 | Homeodomain-like |
| View | Download | 0.318 | a.65.1 | Annexin |
| View | Download | 0.309 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.307 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.306 | d.120.1 | Cytochrome b5 |
| View | Download | 0.279 | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.277 | a.3.1 | Cytochrome c |
| View | Download | 0.274 | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.262 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.259 | a.4.1 | Homeodomain-like |
| View | Download | 0.257 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.254 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.241 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.229 | a.3.1 | Cytochrome c |
| View | Download | 0.227 | a.64.1 | Saposin |
| View | Download | 0.218 | d.27.1 | Ribosomal protein S16 |
| View | Download | 0.215 | a.69.1 | C-terminal domain of alpha and beta subunits of F1 ATP synthase |
| View | Download | 0.209 | a.4.1 | Homeodomain-like |
| View | Download | 0.207 | d.74.2 | C-terminal domain of arginine repressor |
| View | Download | 0.206 | a.60.2 | RuvA domain 2-like |
