| Protein: | IRC3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 689 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IRC3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..689] | [1..689] |
|
|
0.0 | [3..418] | [174..571] |
|
|
0.0 | [3..418] | [269..666] |
|
|
0.0 | [3..417] | [200..596] |
|
|
0.0 | [4..405] | [140..532] |
|
Region A: Residues: [1-410] |
1 11 21 31 41 51
| | | | | |
1 MTSTLATRLS TYSISLILQR IKIIKRCYSA PVLRDYQQDA IDACVNSIRQ GTKRIGVSLA 60
61 TGGGKTVIFS NLINQLRQNY FKERQGNFKS LILVHRRELA LQATATLKKI FPDLKVHIEM 120
121 GKYDCDIEDS DVIVASVQTL IRRLHKYDTN SVNLIIIDEA HHSVANSYRS ILDHFKASTA 180
181 ETKIPVIGFS ATFERADKRA LSMVMDKIVY HRGILEMIDD KWLCEAKFTS VKIEADLSDV 240
241 KSTADDFQLA PLSSLMNTKE INEVILKTYL HKKQEKSLKS TLLFGVDKAH VQSLHKLFKD 300
301 NGINTDYVTS DTKQIERDNI IQKFKNGETE VLMNCGIFTE GTDMPNIDCI LLCRPTKSRS 360
361 LLIQMIGRGL RLHHSKDHCH IIDFIGASSV GVVSAPTLLG IRSDDIEFDD
|
| Detection Method: |  |
| Confidence: | 132.228787 |
| Match: | 1fuuA_ |
| Description: | Initiation factor 4a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.837538244475264 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.420384345567397 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.411077559082206 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.399864241228259 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.398496265411009 | bayes_pls_golite062009 |
| catalytic activity | 0.234613562021476 | bayes_pls_golite062009 |
| hydrolase activity | 0.216831145240405 | bayes_pls_golite062009 |
|
Region A: Residues: [411-523] |
1 11 21 31 41 51
| | | | | |
1 ATVEDLKAIQ GEIIAKQQKI DERLRALFQT DEAAMENVTE RNSVADWIHS ANSVDLTLCS 60
61 FDSFRNFTQS NNSYPSGKEF DEASEAVKEM ELLMNSQYPW VKFASNAWGL PLK
|
| Detection Method: | |
| Confidence: | 72.228787 |
| Match: | 1d9xA_ |
| Description: | Nucleotide excision repair enzyme UvrB |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.837538244475264 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.420384345567397 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.411077559082206 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.399864241228259 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.398496265411009 | bayes_pls_golite062009 |
| catalytic activity | 0.234613562021476 | bayes_pls_golite062009 |
| hydrolase activity | 0.216831145240405 | bayes_pls_golite062009 |
|
Region A: Residues: [524-689] |
1 11 21 31 41 51
| | | | | |
1 GKNHLRIYKE KSEDKLSMVY HLKMYRQLPC FITNKYADYV PKSIIKDANL WNVMSKVEKI 60
61 INTLNSDLEG QTMQYQAISS KYSKWRQTVP TSKQRDFVFR KLKKVYGESS KDFIRLSLDD 120
121 VTTYVNTKMT KGDASNLIFA SSLAPVYPLK SLLRILEYQK RRSFIK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
