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View Structure Prediction Details

Protein: ATG9
Organism: Saccharomyces cerevisiae
Length: 997 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATG9.

Description E-value Query
Range		 Subject
Range
ATG9_YEAST - Autophagy-related protein 9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATG9 PE=1 SV...
ATG9 - Transmembrane protein involved in forming Cvt and autophagic vesicles; cycles between the phagophore...
 0.0 [1..997] [1..997]
atg9 - autophagy associated protein Atg9
ATG9_SCHPO - Autophagy-related protein 9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=atg9 PE=1 SV=1
 0.0 [272..788] [145..667]
Atg9-PA - The gene Autophagy-specific gene 9 is referred to in FlyBase by the symbol Dmel\Atg9 (CG3615, FBgn00...
 0.0 [277..790] [67..587]
atg-9 - status:Partially_confirmed UniProt:Q9TXN6 protein_id:AAC69227.1
 0.0 [296..779] [129..617]
ATG9_ARATH - Autophagy-related protein 9 OS=Arabidopsis thaliana GN=ATG9 PE=2 SV=1
 0.0 [300..779] [68..562]
gi|10438450 - gi|10438450|dbj|BAB15246.1| unnamed protein product [Homo sapiens]
 0.0 [415..789] [1..370]
gi|19069552, gi|... - gi|19074827|ref|NP_586333.1| hypothetical protein ECU11_0270 [Encephalitozoon cuniculi GB-M1], gi|19...
gi|19074827 - gi|19074827|ref|NP_586333.1| hypothetical protein ECU11_0270 [Encephalitozoon cuniculi GB-M1]
 0.001 [379..741] [40..373]

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Predicted Domain #1
Region A:
Residues: [1-229] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERDEYQLPN SHGKNTFLSR IFGLQSDEVN PSLNSQEMSN FPLPDIERGS SLLHSTNDSR  60
   61 EDVDENDLRV PESDQGTSTE EEDEVDEEQV QAYAPQISDG LDGDHQLNSV TSKENVLETE 120
  121 KSNLERLVEG STDDSVPKVG QLSSEEEEDN EFINNDGFDD DTPLFQKSKI HEFSSKKSNT 180
  181 IEDGKRPLFF RHILQNNRPQ RDTQKLFTSS NAIHHDKDKS ANNGPRNIN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [230-856] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNQKHGTKYF GSATQPRFTG SPLNNTNRFT KLFPLRKPNL LSNISVLNNT PEDRINTLSV  60
   61 KERALWKWAN VENLDIFLQD VYNYYLGNGF YCIILEKILN ICTLLFVVFV STYMGHCVDY 120
  121 SKLPTSHRVS DIIIDKCYSN SITGFTKFFL WMFYFFVILK IVQLYFDVQK LSELQNFYKY 180
  181 LLNISDDELQ TLPWQNVIQQ LMYLKDQNAM TANVVEVKAK NRIDAHDVAN RIMRRENYLI 240
  241 ALYNSDILNL SLPIPLFRTN VLTKTLEWNI NLCVMGFVFN ESGFIKQSIL KPSQREFTRE 300
  301 ELQKRFMLAG FLNIILAPFL VTYFVLLYFF RYFNEYKTSP GSIGARQYTP IAEWKFREYN 360
  361 ELYHIFKKRI SLSTTLANKY VDQFPKEKTN LFLKFVSFIC GSFVAILAFL TVFDPENFLN 420
  421 FEITSDRSVI FYITILGAIW SVSRNTITQE YHVFDPEETL KELYEYTHYL PKEWEGRYHK 480
  481 EEIKLEFCKL YNLRIVILLR ELTSLMITPF VLWFSLPSSA GRIVDFFREN SEYVDGLGYV 540
  541 CKYAMFNMKN IDGEDTHSMD EDSLTKKIAV NGSHTLNSKR RSKFTAEDHS DKDLANNKML 600
  601 QSYVYFMDDY SNSENLTGKY QLPAKKG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted functions:

Term Confidence Notes
transporter activity 3.99092542545224 bayes_pls_golite062009
transmembrane transporter activity 3.89508301603205 bayes_pls_golite062009
substrate-specific transporter activity 3.77774486920164 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 3.70710659510165 bayes_pls_golite062009
ion transmembrane transporter activity 3.65362773419219 bayes_pls_golite062009
cation transmembrane transporter activity 3.59612536885223 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 3.31974782515049 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 3.16866260434323 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 3.08808327455436 bayes_pls_golite062009
oxidoreductase activity 2.89313236894612 bayes_pls_golite062009
catalytic activity 1.80540532625606 bayes_pls_golite062009
heme-copper terminal oxidase activity 1.34300351711479 bayes_pls_golite062009
binding 1.20404808556033 bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors 0.99305432969981 bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors, oxygen as acceptor 0.99305432969981 bayes_pls_golite062009
cytochrome-c oxidase activity 0.99305432969981 bayes_pls_golite062009
protein binding 0.557139661667467 bayes_pls_golite062009
active transmembrane transporter activity 0.347545631980102 bayes_pls_golite062009
primary active transmembrane transporter activity 0.333038681822689 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [857-997] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YPNNEGDSFL NNKYSWRKQF QPGQKPELFR IGKHALGPGH NISPAIYSTR NPGKNWDNNN  60
   61 NGDDIKNGTN NATAKNDDNN GNNDHEYVLT ESFLDSGAFP NHDVIDHNKM LNSNYNGNGI 120
  121 LNKGGVLGLV KEYYKKSDVG R

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle