| Protein: | UBX3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 455 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBX3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..455] | [1..455] |
|
|
7.0E-69 | [124..451] | [130..464] |
|
|
9.0E-67 | [124..451] | [144..478] |
|
|
9.0E-61 | [128..451] | [133..463] |
|
|
2.0E-58 | [141..455] | [101..427] |
|
|
1.0E-57 | [135..452] | [325..648] |
|
|
8.0E-57 | [129..453] | [129..462] |
|
Region A: Residues: [1-124] |
1 11 21 31 41 51
| | | | | |
1 MDIFRHTFGN NDDSFIRIPG AFREEPPADL NGRTEDQNSN TNEPTQSRDG RLKSILHFLF 60
61 QAPLIVLYYL LNFIVRSSRL LKPLLRLHGF YQRKHNRLLD HSSQLHRLLE NLENEAQAVT 120
121 CSEG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.815 | a.7.8 | GAT domain |
|
Region A: Residues: [125-288] |
1 11 21 31 41 51
| | | | | |
1 NGNNDDGSNT DSTSNNESSG VQFSFGSLYN PENGTFSKSI MQNSYTELLD ACSEQVKFGV 60
61 IYLHDPLLDN HMDYVNKILC SEAFVNMIRK YQVLLWYGDV TTSEGLQVSN ALKIRQYPLL 120
121 GIISLKAEKK IELIARVEGS ISNYKAQDLE AIFSKNYSRL IQLR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| antioxidant activity | 1.01389552298489 | bayes_pls_golite062009 |
| peroxidase activity | 0.753319016725885 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on peroxide as acceptor | 0.753319016725885 | bayes_pls_golite062009 |
| protein disulfide isomerase activity | 0.162300810242639 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity, transposing S-S bonds | 0.162300810242639 | bayes_pls_golite062009 |
| catalytic activity | 0.129588295266429 | bayes_pls_golite062009 |
| binding | 0.064243103392096 | bayes_pls_golite062009 |
| peroxiredoxin activity | 0.0343881005856616 | bayes_pls_golite062009 |
|
Region A: Residues: [289-356] |
1 11 21 31 41 51
| | | | | |
1 QQRQNIEMQR LIRQQQDSRY QDSLRRDQQR ESERLEQTQR EQMEREHQRI ENQWLLWRKS 60
61 QLKPEPSS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [357-455] |
1 11 21 31 41 51
| | | | | |
1 DKDASKVAIR LENGQRLVRK FDASLPTEEI YAFVELQLHD MLNSENDTLP VYQPANYQHQ 60
61 YSFKLITPVP RRELDLSTKI SDVSGIYPSG NIVMERLDE
|
| Detection Method: | |
| Confidence: | 10.09691 |
| Match: | 1h8cA_ |
| Description: | Fas-assosiated factor 1, Faf1 |
Matching Structure (courtesy of the PDB): |
|
