| Protein: | CHS3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1165 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CHS3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1165] | [1..1165] |
|
|
0.0 | [13..1151] | [60..1184] |
|
|
0.0 | [70..1162] | [1..1081] |
|
|
0.0 | [5..1150] | [50..1183] |
|
|
0.0 | [10..1150] | [48..1184] |
|
|
0.0 | [21..1150] | [61..1181] |
|
|
0.0 | [11..1143] | [6..1153] |
|
Region A: Residues: [1-72] |
1 11 21 31 41 51
| | | | | |
1 MTGLNGDDPD DYYLNLNQDE ESLLRSRHSV GSGAPHRQGS LVRPERSRLN NPDNPHFYYA 60
61 QKTQEQMNHL DV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [73-543] |
1 11 21 31 41 51
| | | | | |
1 LPSSTGVNPN ATRRSGSLRS KGSVRSKFSG RETDSYLLQD MNTTDKKASV KISDEGVAED 60
61 EFDKDGDVDN FEESSTQPIN KSIKPLRKET NDTLSFWQMY CYFITFWAPA PILAFCGMPK 120
121 KERQMAWREK VALISVILYI GAIVAFLTFG FTKTVCSSSK LRLKNNEVST EFVVINGKAY 180
181 ELDTSSRSGI QDVEVDSDTL YGPWSDAGKD ASFLFQNVNG NCHNLITPKS NSSIPHDDDN 240
241 NLAWYFPCKL KNQDGSSKPN FTVENYAGWN CHTSKEDRDA FYGLKSKADV YFTWDGIKNS 300
301 SRNLIVYNGD VLDLDLLDWL EKDDVDYPVV FDDLKTSNLQ GYDLSLVLSN GHERKIARCL 360
361 SEIIKVGEVD SKTVGCIASD VVLYVSLVFI LSVVIIKFII ACYFRWTVAR KQGAYIVDNK 420
421 TMDKHTNDIE DWSNNIQTKA PLKEVDPHLR PKKYSKKSLG HKRASTFDLL K
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [544-627] |
1 11 21 31 41 51
| | | | | |
1 KHSSKMFQFN ESVIDLDTSM SSSLQSSGSY RGMTTMTTQN AWKLSNENKA VHSRNPSTLL 60
61 PTSSMFWNKA TSSPVPGSSL IQSL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [628-1165] |
1 11 21 31 41 51
| | | | | |
1 DSTIIHPDIV QQPPLDFMPY GFPLIHTICF VTCYSEDEEG LRTTLDSLST TDYPNSHKLL 60
61 MVVCDGLIKG SGNDKTTPEI ALGMMDDFVT PPDEVKPYSY VAVASGSKRH NMAKIYAGFY 120
121 KYDDSTIPPE NQQRVPIITI VKCGTPAEQG AAKPGNRGKR DSQIILMSFL EKITFDERMT 180
181 QLEFQLLKNI WQITGLMADF YETVLMVDAD TKVFPDALTH MVAEMVKDPL IMGLCGETKI 240
241 ANKAQSWVTA IQVFEYYISH HQAKAFESVF GSVTCLPGCF SMYRIKSPKG SDGYWVPVLA 300
301 NPDIVERYSD NVTNTLHKKN LLLLGEDRFL SSLMLKTFPK RKQVFVPKAA CKTIAPDKFK 360
361 VLLSQRRRWI NSTVHNLFEL VLIRDLCGTF CFSMQFVIGI ELIGTMVLPL AICFTIYVII 420
421 FAIVSKPTPV ITLVLLAIIL GLPGLIVVIT ATRWSYLWWM CVYICALPIW NFVLPSYAYW 480
481 KFDDFSWGDT RTIAGGNKKA QDENEGEFDH SKIKMRTWRE FEREDILNRK EESDSFVA
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | PF03142 |
| Description: | Chitin synthase |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [642-739] |
1 11 21 31 41 51
| | | | | |
1 LDFMPYGFPL IHTICFVTCY SEDEEGLRTT LDSLSTTDYP NSHKLLMVVC DGLIKGSGND 60
61 KTTPEIALGM MDDFVTPPDE VKPYSYVAVA SGSKRHNM
|
| Detection Method: | |
| Confidence: | 5.075721 |
| Match: | PF03142.6 |
| Description: | No description for PF03142.6 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [740-984] |
1 11 21 31 41 51
| | | | | |
1 AKIYAGFYKY DDSTIPPENQ QRVPIITIVK CGTPAEQGAA KPGNRGKRDS QIILMSFLEK 60
61 ITFDERMTQL EFQLLKNIWQ ITGLMADFYE TVLMVDADTK VFPDALTHMV AEMVKDPLIM 120
121 GLCGETKIAN KAQSWVTAIQ VFEYYISHHQ AKAFESVFGS VTCLPGCFSM YRIKSPKGSD 180
181 GYWVPVLANP DIVERYSDNV TNTLHKKNLL LLGEDRFLSS LMLKTFPKRK QVFVPKAACK 240
241 TIAPD
|
| Detection Method: | |
| Confidence: | 2.0 |
| Match: | 1h7lA |
| Description: | Spore coat polysaccharide biosynthesis protein SpsA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transferase activity, transferring hexosyl groups | 2.23446625487311 | bayes_pls_golite062009 |
| UDP-glycosyltransferase activity | 1.84596125277114 | bayes_pls_golite062009 |
| catalytic activity | 1.73979371332125 | bayes_pls_golite062009 |
| transferase activity | 1.18156663897445 | bayes_pls_golite062009 |
| acetylgalactosaminyltransferase activity | 0.823843077041128 | bayes_pls_golite062009 |
| cytidylyltransferase activity | 0.666765511953956 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.641710647713692 | bayes_pls_golite062009 |
| binding | 0.61043334112269 | bayes_pls_golite062009 |
| polypeptide N-acetylgalactosaminyltransferase activity | 0.600389101620522 | bayes_pls_golite062009 |
| transferase activity, transferring glycosyl groups | 0.539883035270389 | bayes_pls_golite062009 |
| mannosyltransferase activity | 0.505948108814334 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.301396160525425 | bayes_pls_golite062009 |
| UDP-N-acetylglucosamine diphosphorylase activity | 0.0309517682490415 | bayes_pls_golite062009 |
|
Region A: Residues: [985-1165] |
1 11 21 31 41 51
| | | | | |
1 KFKVLLSQRR RWINSTVHNL FELVLIRDLC GTFCFSMQFV IGIELIGTMV LPLAICFTIY 60
61 VIIFAIVSKP TPVITLVLLA IILGLPGLIV VITATRWSYL WWMCVYICAL PIWNFVLPSY 120
121 AYWKFDDFSW GDTRTIAGGN KKAQDENEGE FDHSKIKMRT WREFEREDIL NRKEESDSFV 180
181 A
|
| Detection Method: | |
| Confidence: | 14.744727 |
| Match: | PF03142.6 |
| Description: | No description for PF03142.6 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
