| Protein: | gi|123994237, gi... |
| Organism: | synthetic construct |
| Length: | 592 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|123994237, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..592] | [1..592] |
|
|
0.0 | [1..592] | [1..592] |
|
|
0.0 | [1..592] | [1..592] |
|
|
0.0 | [1..592] | [1..592] |
|
|
0.0 | [1..592] | [1..592] |
|
|
0.0 | [1..592] | [1..593] |
|
Region A: Residues: [1-461] |
1 11 21 31 41 51
| | | | | |
1 MEGKWLLCML LVLGTAIVEA HDGHDDDVID IEDDLDDVIE EVEDSKPDTT APPSSPKVTY 60
61 KAPVPTGEVY FADSFDRGTL SGWILSKAKK DDTDDEIAKY DGKWEVEEMK ESKLPGDKGL 120
121 VLMSRAKHHA ISAKLNKPFL FDTKPLIVQY EVNFQNGIEC GGAYVKLLSK TPELNLDQFH 180
181 DKTPYTIMFG PDKCGEDYKL HFIFRHKNPK TGIYEEKHAK RPDADLKTYF TDKKTHLYTL 240
241 ILNPDNSFEI LVDQSVVNSG NLLNDMTPPV NPSREIEDPE DRKPEDWDER PKIPDPEAVK 300
301 PDDWDEDAPA KIPDEEATKP EGWLDDEPEY VPDPDAEKPE DWDEDMDGEW EAPQIANPRC 360
361 ESAPGCGVWQ RPVIDNPNYK GKWKPPMIDN PSYQGIWKPR KIPNPDFFED LEPFRMTPFS 420
421 AIGLELWSMT SDIFFDNFII CADRRIVDDW ANDGWGLKKA A
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1jhnA |
| Description: | Calnexin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| complement component C1q binding | 4.81971897425786 | bayes_pls_golite062009 |
| steroid hormone receptor binding | 4.11346029337178 | bayes_pls_golite062009 |
| androgen receptor binding | 3.88449123711676 | bayes_pls_golite062009 |
| zymosan binding | 3.41405218556083 | bayes_pls_golite062009 |
| nuclear hormone receptor binding | 3.3517714661273 | bayes_pls_golite062009 |
| binding | 3.24845777545007 | bayes_pls_golite062009 |
| hormone receptor binding | 3.2405597896178 | bayes_pls_golite062009 |
| structural molecule activity | 3.0286932947016 | bayes_pls_golite062009 |
| unfolded protein binding | 2.94586353433162 | bayes_pls_golite062009 |
| protein binding | 2.62442480878692 | bayes_pls_golite062009 |
| transcription regulator activity | 2.5786381493734 | bayes_pls_golite062009 |
| transcription repressor activity | 2.42862869142896 | bayes_pls_golite062009 |
| nucleic acid binding | 2.33705817770533 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.16616430987996 | bayes_pls_golite062009 |
| actin binding | 2.0669297251683 | bayes_pls_golite062009 |
| DNA binding | 2.05388036301171 | bayes_pls_golite062009 |
| carbohydrate binding | 1.90829797790335 | bayes_pls_golite062009 |
| sugar binding | 1.89824804892868 | bayes_pls_golite062009 |
| receptor binding | 1.70102429470678 | bayes_pls_golite062009 |
| molecular transducer activity | 1.69567186252006 | bayes_pls_golite062009 |
| signal transducer activity | 1.69567186252006 | bayes_pls_golite062009 |
| cation binding | 1.67588357161378 | bayes_pls_golite062009 |
| metal ion binding | 1.67588357161378 | bayes_pls_golite062009 |
| ion binding | 1.66900324045723 | bayes_pls_golite062009 |
| NACHT domain binding | 1.53382521801494 | bayes_pls_golite062009 |
| integrin binding | 1.36513827550387 | bayes_pls_golite062009 |
| transporter activity | 1.29150662073327 | bayes_pls_golite062009 |
| chaperone binding | 1.28860282614448 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.25720635817943 | bayes_pls_golite062009 |
| protein complex binding | 1.23240411516711 | bayes_pls_golite062009 |
| RNA binding | 1.22339134958708 | bayes_pls_golite062009 |
| heparin binding | 1.15897181987617 | bayes_pls_golite062009 |
| transcription factor activity | 1.15427978494805 | bayes_pls_golite062009 |
| transcription activator activity | 1.11465354227601 | bayes_pls_golite062009 |
| polysaccharide binding | 1.09475063562581 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.07075219961504 | bayes_pls_golite062009 |
| receptor activity | 0.946182305131481 | bayes_pls_golite062009 |
| growth factor activity | 0.850395354506359 | bayes_pls_golite062009 |
| pattern binding | 0.83687933614214 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.814690646803591 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.801327928563072 | bayes_pls_golite062009 |
| mRNA binding | 0.67699218614597 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.546870122670733 | bayes_pls_golite062009 |
| extracellular matrix structural constituent | 0.52360080681204 | bayes_pls_golite062009 |
| calcium ion binding | 0.416416901481401 | bayes_pls_golite062009 |
| hydrolase activity | 0.374282208763552 | bayes_pls_golite062009 |
| monosaccharide binding | 0.30021811359531 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.160855218996334 | bayes_pls_golite062009 |
| growth factor binding | 0.0922754536898114 | bayes_pls_golite062009 |
| cytokine binding | 0.0273545648165503 | bayes_pls_golite062009 |
|
Region A: Residues: [462-592] |
1 11 21 31 41 51
| | | | | |
1 DGAAEPGVVG QMIEAAEERP WLWVVYILTV ALPVFLVILF CCSGKKQTSG MEYKKTDAPQ 60
61 PDVKEEEEEK EEEKDKGDEE EEGEEKLEEK QKSDAEEDGG TVSQEEEDRK PKAEEDEILN 120
121 RSPRNRKPRR E
|
| Detection Method: | |
| Confidence: | 1.06 |
| Match: | 1xioA |
| Description: | Anabaena sensory rhodopsin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor activity | 5.71511901997004 | bayes_pls_golite062009 |
| molecular transducer activity | 5.61350014268597 | bayes_pls_golite062009 |
| signal transducer activity | 5.61350014268597 | bayes_pls_golite062009 |
| transmembrane receptor activity | 5.58555301193414 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 5.41529591910182 | bayes_pls_golite062009 |
| peptide receptor activity, G-protein coupled | 3.24471753253048 | bayes_pls_golite062009 |
| peptide receptor activity | 3.23046660892783 | bayes_pls_golite062009 |
| neurotransmitter receptor activity | 3.03590612786084 | bayes_pls_golite062009 |
| neurotransmitter binding | 2.87541888740041 | bayes_pls_golite062009 |
| binding | 2.71594484029277 | bayes_pls_golite062009 |
| retinoid binding | 2.58438397457659 | bayes_pls_golite062009 |
| neuropeptide binding | 2.5572151942717 | bayes_pls_golite062009 |
| neuropeptide receptor activity | 2.5572151942717 | bayes_pls_golite062009 |
| peptide binding | 2.47316566757854 | bayes_pls_golite062009 |
| transcription regulator activity | 2.32212946143908 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.17826584341947 | bayes_pls_golite062009 |
| actin binding | 2.08059977933242 | bayes_pls_golite062009 |
| photoreceptor activity | 1.92030609001248 | bayes_pls_golite062009 |
| G-protein coupled photoreceptor activity | 1.75401574694128 | bayes_pls_golite062009 |
| olfactory receptor activity | 1.74485554578055 | bayes_pls_golite062009 |
| G-protein coupled amine receptor activity | 1.62445512756943 | bayes_pls_golite062009 |
| protein binding | 1.56336697234632 | bayes_pls_golite062009 |
| transporter activity | 1.30218997091612 | bayes_pls_golite062009 |
| adrenoceptor activity | 1.12689604411271 | bayes_pls_golite062009 |
| transcription activator activity | 1.11159623868222 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.0814547765264 | bayes_pls_golite062009 |
| receptor binding | 1.001204253999 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.812148444888997 | bayes_pls_golite062009 |
| beta-adrenergic receptor activity | 0.791607122563198 | bayes_pls_golite062009 |
| beta2-adrenergic receptor activity | 0.791607122563198 | bayes_pls_golite062009 |
| norepinephrine binding | 0.791607122563198 | bayes_pls_golite062009 |
| hydrolase activity | 0.710357725030197 | bayes_pls_golite062009 |
| hormone receptor binding | 0.595060106958951 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.557839263512813 | bayes_pls_golite062009 |
| amine binding | 0.347034928753624 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.257270201080225 | bayes_pls_golite062009 |
| gated channel activity | 0.118432105996465 | bayes_pls_golite062009 |
| cytokine binding | 0.0462461949424156 | bayes_pls_golite062009 |
| catalytic activity | 0.0258814412140621 | bayes_pls_golite062009 |
