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View Structure Prediction Details

Protein: NCALD_RAT
Organism: Rattus norvegicus
Length: 193 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NCALD_RAT.

Description E-value Query
Range
Subject
Range
gi|109001730 - gi|109001730|ref|XP_001098851.1| PREDICTED: similar to Neuron-specific calcium-binding protein hippo...
8.0E-43 [1..193] [216..408]
gi|114555708 - gi|114555708|ref|XP_001155509.1| PREDICTED: similar to Neuron specific calcium-binding protein P23K ...
1.0E-42 [1..193] [152..344]
gi|73980372 - gi|73980372|ref|XP_852217.1| PREDICTED: similar to hippocalcin-like 1 [Canis familiaris]
6.0E-42 [1..193] [137..329]
gi|50748592 - gi|50748592|ref|XP_421316.1| PREDICTED: similar to calmodulin 1; Calmodulin 1 (phosphorylase kinase,...
3.0E-40 [18..174] [511..657]
gi|76668066 - gi|76668066|ref|XP_609831.2| PREDICTED: similar to Hippocalcin-like protein 4 (HLP4) [Bos taurus]
2.0E-37 [1..186] [284..471]
gi|47221269 - gi|47221269|emb|CAG13205.1| unnamed protein product [Tetraodon nigroviridis]
4.0E-37 [1..186] [1..188]
gi|94471603 - gi|94471603|gb|ABF21069.1| mitochondrial calcium sensor cameleon 4mtD3cpv [synthetic construct]
2.0E-36 [11..174] [355..508]
HGNC:5145|MIM:60... - 1
gi|61360191, gi|... - gi|61360191|gb|AAX41825.1| hippocalcin-like 1 [synthetic construct], gi|61360183|gb|AAX41824.1| hipp...
HPCAL1 - hippocalcin-like 1
4.0E-35 [1..193] [1..193]

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Predicted Domain #1
Region A:
Residues: [1-193]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKQNSKLRP EVMQDLLEST DFTEHEIQEW YKGFLRDCPS GHLSMEEFKK IYGNFFPYGD  60
   61 ASKFAEHVFR TFDANGDGTI DFREFIIALS VTSRGKLEQK LKWAFSMYDL DGNGYISKAE 120
  121 MLEIVQAIYK MVSSVMKMPE DESTPEKRTE KIFRQMDTNR DGKLSLEEFI RGAKSDPSIV 180
  181 RLLQCDPSSA GQF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.0
Match: 1bjfA
Description: Neurocalcin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoprotein phosphatase activity 7.47426847861728 bayes_pls_golite062009
protein serine/threonine phosphatase activity 6.37104157544514 bayes_pls_golite062009
phosphatase activity 6.28157965296365 bayes_pls_golite062009
phosphoric ester hydrolase activity 6.17799259119197 bayes_pls_golite062009
calcium-dependent protein serine/threonine phosphatase activity 5.58369939851095 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 5.11186887221409 bayes_pls_golite062009
calcium-dependent protein serine/threonine phosphatase regulator activity 4.70715233640875 bayes_pls_golite062009
calcium ion binding 3.79609619542776 bayes_pls_golite062009
binding 3.17556402087346 bayes_pls_golite062009
metal ion binding 2.62077305565026 bayes_pls_golite062009
cation binding 2.62077305565026 bayes_pls_golite062009
ion binding 2.61312132078717 bayes_pls_golite062009
ion transmembrane transporter activity 2.57032504567157 bayes_pls_golite062009
cation transmembrane transporter activity 2.55650624542181 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 2.37465721152046 bayes_pls_golite062009
clathrin binding 2.36616108128297 bayes_pls_golite062009
protein binding 2.21291432166051 bayes_pls_golite062009
metal ion transmembrane transporter activity 1.99763594451773 bayes_pls_golite062009
transcription regulator activity 1.9739523190593 bayes_pls_golite062009
cytoskeletal protein binding 1.6550001867465 bayes_pls_golite062009
DNA binding 1.55722307354604 bayes_pls_golite062009
nucleic acid binding 1.53225451586959 bayes_pls_golite062009
structural constituent of muscle 1.30577051923353 bayes_pls_golite062009
calcium-dependent protein kinase inhibitor activity 1.29632226581856 bayes_pls_golite062009
actin filament binding 1.25849450788569 bayes_pls_golite062009
actin binding 1.1967948958876 bayes_pls_golite062009
transporter activity 1.15928534291452 bayes_pls_golite062009
molecular transducer activity 1.11607939838219 bayes_pls_golite062009
signal transducer activity 1.11607939838219 bayes_pls_golite062009
transmembrane transporter activity 0.945691505472547 bayes_pls_golite062009
phosphatase regulator activity 0.87149881541475 bayes_pls_golite062009
motor activity 0.85125321350375 bayes_pls_golite062009
guanylate cyclase regulator activity 0.84389905735679 bayes_pls_golite062009
cyclase regulator activity 0.84389905735679 bayes_pls_golite062009
protein phosphatase regulator activity 0.822713961141111 bayes_pls_golite062009
cation channel activity 0.802117767859521 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.787740261079819 bayes_pls_golite062009
kinase activity 0.782396352346639 bayes_pls_golite062009
calcium channel regulator activity 0.7164851905066 bayes_pls_golite062009
substrate-specific transporter activity 0.693724160233023 bayes_pls_golite062009
transcription repressor activity 0.666488715029225 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.654002071540024 bayes_pls_golite062009
calcium sensitive guanylate cyclase activator activity 0.630360514213104 bayes_pls_golite062009
microfilament motor activity 0.515693296786409 bayes_pls_golite062009
passive transmembrane transporter activity 0.386960491413065 bayes_pls_golite062009
channel activity 0.386960491413065 bayes_pls_golite062009
substrate-specific channel activity 0.362205423422174 bayes_pls_golite062009
0.34446792626966 bayes_pls_golite062009
ion channel activity 0.343477643719352 bayes_pls_golite062009
channel regulator activity 0.32809521759917 bayes_pls_golite062009
voltage-gated channel activity 0.308919475701377 bayes_pls_golite062009
voltage-gated ion channel activity 0.304496519713588 bayes_pls_golite062009
voltage-gated cation channel activity 0.278054748078249 bayes_pls_golite062009
active transmembrane transporter activity 0.246383459363256 bayes_pls_golite062009
potassium channel activity 0.200283164564768 bayes_pls_golite062009
gated channel activity 0.150185445887481 bayes_pls_golite062009
voltage-gated potassium channel activity 0.109511951498555 bayes_pls_golite062009
structural molecule activity 0.048100972187449 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle