| Protein: | gi|29501524 |
| Organism: | Plasmodium falciparum |
| Length: | 545 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29501524.
| Description | E-value | Query Range |
Subject Range |
|
|
369.0 | [0..4] | [544..8] |
|
|
363.0 | [0..4] | [545..10] |
|
|
361.0 | [0..3] | [544..7] |
|
|
356.0 | [0..3] | [544..8] |
|
Region A: Residues: [1-545] |
1 11 21 31 41 51
| | | | | |
1 MDRRIEARRK EFKKNCDDTR RKREDLVVQI RKQQRECQLE SKRAMVMANI GFEENNTYNL 60
61 NYAKGNQNDS TNDSIYNTSS NNSSNTLEML KKIPTLAIGV RSNEYVTQLN STRELRKLLS 120
121 IEKGPPIQEV INSGVVPYIV EFLKYDDKTD LQFEAAWVIT NIASGSQEQT KVVIDNNAVP 180
181 HLVRLLSSEK EDVCEQAVWA LGNIAGDSAE CREYVLNQNS LPLLLKILRT SHKRTLIRNA 240
241 AWTLSNLCRG KPAPKFEIVS KALPTLAALI YNDDEEILTD ACWTLSYLSD GSNENINSVL 300
301 DAGVAERVVE LLSHCSFLVQ TPALRTVGNI VTGDDLQTDV VVKLGAVQKL SCLLNSSKKS 360
361 IKKEACWALS NITAGNISQI QAVIDNNVIP QLINILMKED FEVRKEAAWA ISNASSGGSE 420
421 LQIEYLVECG AIHSLSNLLD VEDANIISVT LEGLENILEM GENKKLRDNL PTNPYVHLFE 480
481 ECDSVHKIDA LQDRKVDNIC NKAWKILYKY FPFVINNELN NAQIPLNNVF ANTEDAVLNK 540
541 DFTFD
|
| Detection Method: |  |
| Confidence: | 86.154902 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein transporter activity | 4.58709163830613 | bayes_pls_golite062009 |
| nuclear export signal receptor activity | 3.48172991171337 | bayes_pls_golite062009 |
| binding | 3.0667965351474 | bayes_pls_golite062009 |
| nucleic acid binding | 2.74745843355294 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 2.74547353635661 | bayes_pls_golite062009 |
| transporter activity | 2.48700774379895 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.26725422172281 | bayes_pls_golite062009 |
| transcription regulator activity | 2.16673352512615 | bayes_pls_golite062009 |
| DNA binding | 1.95242774903625 | bayes_pls_golite062009 |
| actin binding | 1.92303661041222 | bayes_pls_golite062009 |
| nuclear localization sequence binding | 1.91487015967262 | bayes_pls_golite062009 |
| protein binding | 1.73688475473996 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.71123825371014 | bayes_pls_golite062009 |
| molecular transducer activity | 1.32874350341969 | bayes_pls_golite062009 |
| signal transducer activity | 1.32874350341969 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.28481004323799 | bayes_pls_golite062009 |
| transcription factor activity | 1.20660383756339 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.09652988954158 | bayes_pls_golite062009 |
| signal sequence binding | 0.57106697498903 | bayes_pls_golite062009 |
| RNA binding | 0.40024158562931 | bayes_pls_golite062009 |
| structural molecule activity | 0.279926218252647 | bayes_pls_golite062009 |
| importin-alpha export receptor activity | 0.259676026705859 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.252495966234234 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.248585912061178 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.226380819487924 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.217517113570989 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.178770060806735 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.175241020572885 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.174922130116569 | bayes_pls_golite062009 |
| transcription activator activity | 0.160275383613705 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.100181463251306 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.0635404099346928 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.0548082069333885 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.052195223119721 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0405268469927988 | bayes_pls_golite062009 |
| transcription factor binding | 0.0221966060394205 | bayes_pls_golite062009 |
