Protein: | gi|18844938, gi|... |
Organism: | Oryza sativa Japonica Group |
Length: | 221 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18844938, gi|....
Description | E-value | Query Range |
Subject Range |
|
164.0 | [0..2] | [221..176] |
Region A: Residues: [1-221] |
1 11 21 31 41 51 | | | | | | 1 MADVFEGYER QYCEISASLA RKCTAASALQ GEKLKQKASE IKSGIDGAEA LIKKMDLEAR 60 61 NQQPSVRAGL LAKLREYKSD LNNLKGTLKR VTTGNAQQGS REELLESGMA ETLGVSADQK 120 121 SRLLRITEKQ NKTTDRIRDS HRTMLETEDL GVSLLQDLHQ QRERLIHAHG TLDNVDDNIG 180 181 KSRRIMGAMV RRMDRNKWII GFIIALLVLV ILVILYFKFV H |
Detection Method: | |
Confidence: | 15.0 |
Match: | 1dn1B |
Description: | Syntaxin 1A N-terminal domain |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
phosphatidic acid binding | 5.99692791841048 | bayes_pls_golite062009 |
SNAP receptor activity | 3.50393203740159 | bayes_pls_golite062009 |
calcium channel inhibitor activity | 2.99240433552966 | bayes_pls_golite062009 |
protein transporter activity | 2.96543140800925 | bayes_pls_golite062009 |
arachidonic acid binding | 2.43181217934756 | bayes_pls_golite062009 |
binding | 2.18404492932496 | bayes_pls_golite062009 |
SNARE binding | 1.85060343142976 | bayes_pls_golite062009 |
protein binding | 1.82422117934251 | bayes_pls_golite062009 |
transporter activity | 1.74189664015129 | bayes_pls_golite062009 |
substrate-specific transporter activity | 1.49085442233849 | bayes_pls_golite062009 |
transmembrane transporter activity | 1.13101548288086 | bayes_pls_golite062009 |
substrate-specific transmembrane transporter activity | 0.643064875848901 | bayes_pls_golite062009 |
ion transmembrane transporter activity | 0.370484918396857 | bayes_pls_golite062009 |
channel activity | 0.0647076360772156 | bayes_pls_golite062009 |
passive transmembrane transporter activity | 0.0647076360772156 | bayes_pls_golite062009 |
substrate-specific channel activity | 0.0435980899803177 | bayes_pls_golite062009 |
phospholipid binding | 0.0172309833091902 | bayes_pls_golite062009 |