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View Structure Prediction Details

Protein: ENT7_ARATH
Organism: Arabidopsis thaliana
Length: 417 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ENT7_ARATH.

Description E-value Query
Range
Subject
Range
gi|50754521 - gi|50754521|ref|XP_414421.1| PREDICTED: similar to solute carrier family 16, member 7; monocarboxyla...
234.0 [0..2] [417..262]

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Predicted Domain #1
Region A:
Residues: [1-417]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNPEDIPSR IEGKNVARLV CCFLGVGSLV AWNAMLTITD YYYQLFPKYH PSRVLTIVYQ  60
   61 LVANVFIITL ATKEAKLNTR LRNIFGYSLY TAGTFCLIIL DLASHGSGSV VAYVLLCLIV 120
  121 ALFGLADAFV QGAMVGDLSF MSPDFIQAFM AGLGIAGALT SVLRLITKAI FDNSPDGLRK 180
  181 GALLFIGIAT LIELACVFLY TLVFAKLPIV KYYRAKAGKE GAKTVSADLA AAGLQEQAEQ 240
  241 VHQMDESKIQ KLTKKQLLRE NIDLGINLSL IYVVTLSIFP GFLYENTGEH RLGDWYAPVL 300
  301 VAMYNGWDAI SRFIPSIKPL AMESRKWITV CVVARLLLVP AFYFTAKYAD QGWMLFLTSF 360
  361 LGLSNGYLTV CIFSTAPKGY NGPEANALGN LMCVFLLGGI FAGVCLGWLW LIGNDSF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.0
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transporter activity 4.09176719149278 bayes_pls_golite062009
transmembrane transporter activity 3.5865018981083 bayes_pls_golite062009
substrate-specific transporter activity 3.3426261924492 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 3.29689809004391 bayes_pls_golite062009
ion transmembrane transporter activity 1.94035843948137 bayes_pls_golite062009
active transmembrane transporter activity 1.59419818573076 bayes_pls_golite062009
cation transmembrane transporter activity 1.5181741634556 bayes_pls_golite062009
secondary active transmembrane transporter activity 1.22264637452409 bayes_pls_golite062009
polyol transmembrane transporter activity 0.924836669821548 bayes_pls_golite062009
alcohol transmembrane transporter activity 0.924836669821548 bayes_pls_golite062009
glycerol transmembrane transporter activity 0.812001619402678 bayes_pls_golite062009
binding 0.805286077372817 bayes_pls_golite062009
symporter activity 0.74591237387473 bayes_pls_golite062009
solute:cation symporter activity 0.74591237387473 bayes_pls_golite062009
sugar:hydrogen symporter activity 0.143419068761182 bayes_pls_golite062009
cation:sugar symporter activity 0.143419068761182 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle