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View Structure Prediction Details

Protein: gi|30262365, gi|...
Organism: Bacillus anthracis str. Ames
Length: 1029 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30262365, gi|....

Description E-value Query
Range
Subject
Range
gi|42781454, gi|... - gi|42781454|ref|NP_978701.1| exonuclease, putative [Bacillus cereus ATCC 10987], gi|42737376|gb|AAS4...
1.0E-57 [1..1029] [1..1029]
gi|29895979, gi|... - gi|30020428|ref|NP_832059.1| exonuclease SbcC [Bacillus cereus ATCC 14579], gi|29895979|gb|AAP09260....
2.0E-57 [1..1029] [1..1029]
gi|89205501, gi|... - gi|89205501|ref|ZP_01184070.1| exonuclease [Bacillus weihenstephanensis KBAB4], gi|89156517|gb|EAR76...
1.0E-56 [1..1029] [1..1029]
gi|52143116, gi|... - gi|52143116|ref|YP_083713.1| exonuclease [Bacillus cereus E33L], gi|51976585|gb|AAU18135.1| exonucle...
2.0E-56 [1..1029] [1..1029]
gi|49477636, gi|... - gi|49477636|ref|YP_036463.1| exonuclease SbcC [Bacillus thuringiensis serovar konkukian str. 97-27],...
7.0E-56 [1..1029] [1..1029]
gi|47557353, gi|... - gi|47565717|ref|ZP_00236757.1| exonuclease SbcC, putative [Bacillus cereus G9241], gi|47557353|gb|EA...
4.0E-55 [1..1029] [1..1029]
gi|89199792, gi|... - gi|89199792|ref|ZP_01178549.1| sbcC; exonuclease [Bacillus cereus subsp. cytotoxis NVH 391-98], gi|8...
3.0E-53 [1..1029] [1..1029]
gi|22777935, gi|... - gi|23099705|ref|NP_693171.1| exonuclease [Oceanobacillus iheyensis HTE831], gi|22777935|dbj|BAC14206...
8.0E-44 [1..1029] [1..1029]
gi|73980575 - gi|73980575|ref|XP_532882.2| PREDICTED: similar to SMC6 protein [Canis familiaris]
2.0E-42 [2..999] [562..1564]
gi|37200788, gi|... - gi|37676247|ref|NP_936643.1| putative exonuclease SbcC [Vibrio vulnificus YJ016], gi|37200788|dbj|BA...
6.0E-39 [1..1022] [1..1007]

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Predicted Domain #1
Region A:
Residues: [1-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPIQLIMTA FGPYKQKEVI DFDDLGEHRI FAISGNTGAG KTTIFDAICY VLYGEASGEE  60
   61 RSDTSMLRSQ FADDNVYTSV ELTFQLKGKR YEIKRQLGHK KQGNKTITGH AVELYEVIDE 120
  121 EKVPAVDRFH VTDVNKKVED LIGLSKHQFS QIVMLPQGEF RKLLTSETEN KEEILRRIFK 180
  181 TDRYKLMREL LDQKRKQWKD VLQEKQKERE LYFRNVFKLP IRDGAILETL VEQEHVNTHQ 240
  241 VVEALEQETA VYKAEVEQLQ VEQDVQTKQL KD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.522879
Match: 1w1wA
Description: Sc Smc1hd:Scc1-C complex, ATPgS
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.37148167194523 bayes_pls_golite062009
pyrophosphatase activity 1.16998111465319 bayes_pls_golite062009
binding 0.712909626033412 bayes_pls_golite062009
helicase activity 0.00674361801283974 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [273-358]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AETRFHAAKS VNEKFIDLQQ KNEKYNTLQE NRTVIEMKET SFKRAEQAKR LLPFEQWHEE  60
   61 AMQNEQKAES LLKQIIAKKE NIMNNF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [359-532]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ELAQEKYEVV KNKESERENV KKLVQRLEEL QPIIASLAEK QLNLQNAEIQ IGKLKESMQN  60
   61 LDRQLEEHTN QKQLMTGELQ QLEQALEQYV DKVEELTNMR EDAKVLKQAY DVWQEKQKFE 120
  121 KEKEAAYSKM QLAVNAYENM ERRWLSEQAG ILALHLHDGE SCPVCGSTTH PKKA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [533-851]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TEQSGAIDEN ELNGLRDKKN IAEKLHVQLE EKWNFYHHQY EQVIEEVKKR GYQSEELVET  60
   61 YSALVQKGKQ LATEVNTLKA SEETRKQIAV KIKSVEEKVD ALQKQKREVE TEQHRIEMDC 120
  121 MQLRTSYEHD KKNIPENLQT VQAWKVQFDQ AMHELKLMED EWKKVQEAYQ HWQNENIRIQ 180
  181 AEQEGATNQF ESAKLKKEET FTRFMKELEQ SGFTDQSTYK EAKLSDAEME LIQKEIQSYY 240
  241 SFLEVLAKQI EELHVELKDK EYMDITALGE HIKELEINLD IIKEKRQRAQ NAVTYISDLH 300
  301 ENIRRIDEQI HEEEKAFQE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.45
Match: 1c1gA
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

Predicted Domain #5
Region A:
Residues: [852-1029]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LVDLYEVMKG DNESRISFER YILIEYLEQI VQIANERLRK LSNGQFYLKR SERVEKRNRQ  60
   61 SGLGLDVYDA YTGQTRDVKT LSGGEKFNAS LCLALGMADV IQAYEGGISI ETMFIDEGFG 120
  121 SLDEESLTKA VDTLIDLQKS GRFIGVISHV QELKNAMPAV LEVTKQKDGC SQTRFVVK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.69897
Match: 1v43A
Description: Crystal Structure of ATPase subunit of ABC Sugar Transporter
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.37148167194523 bayes_pls_golite062009
pyrophosphatase activity 1.16998111465319 bayes_pls_golite062009
binding 0.712909626033412 bayes_pls_golite062009
helicase activity 0.00674361801283974 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle