| Protein: | gi|30261151, gi|... |
| Organism: | Bacillus anthracis str. Ames |
| Length: | 560 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30261151, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-96 | [2..560] | [51..613] |
|
|
5.0E-96 | [1..560] | [1..560] |
|
|
5.0E-96 | [2..560] | [17..579] |
|
|
6.0E-96 | [1..560] | [1..560] |
|
|
7.0E-96 | [1..560] | [1..560] |
|
|
7.0E-96 | [2..560] | [51..613] |
|
Region A: Residues: [1-459] |
1 11 21 31 41 51
| | | | | |
1 MKFSSKQRKD VLNGVNKQEL DVIVIGGGIT GSGIALDGAT RGLSTIVFEM QDFAAGTSSR 60
61 STKLVHGGLR YLKQLEVKMV AEVGKERAIV YENGPHVTTP EWMLLPFHTG GTFGSFSTSI 120
121 GLRVYDFLAG VKRSERRKMF NREETLKKEP LVKQEGLKGG GYYVEYRTDD ARLTIEVMKE 180
181 AIEHGAKAVN YAKVDGFLYK DGKVCGVRVI DLLDGEVYEV YGKKIVNAAG PWVDTLREKD 240
241 NSKKGKVLQL SKGVHLVIDQ KRFPLGQAIY FDTPDKRMVF AIPRGGKTYV GTTDTFYDKD 300
301 AAVPQMTTED RTYIINAINY MFPSVKITEK DIESSWAGVR PLIYEEGKSA SEISRKDEIW 360
361 TSESGLITIA GGKLTGYRKM AEMVVDYVTN LLQKEGHSAY PKSSTKHMPI SGGHVDGSKG 420
421 LPAFIAKKAG EGTKYGLTTA QAEEFAKFYG SNVDVLFDL
|
| Detection Method: |  |
| Confidence: | 30.39794 |
| Match: | 1pj5A |
| Description: | Crystal structure of dimethylglycine oxidase of Arthrobacter globiformis in complex with acetate |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor | 2.25002926602325 | bayes_pls_golite062009 |
| electron-transferring-flavoprotein dehydrogenase activity | 1.55451764082771 | bayes_pls_golite062009 |
| oxidoreductase activity | 1.52511707514198 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor | 1.45104542724719 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH2 group of donors | 1.35744482443829 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on sulfur group of donors | 1.18990628739838 | bayes_pls_golite062009 |
| antioxidant activity | 1.12347155061135 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor | 1.08975609376408 | bayes_pls_golite062009 |
| catalytic activity | 1.03127962968326 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on NADH or NADPH | 0.985237795107607 | bayes_pls_golite062009 |
| binding | 0.850689563354756 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH group of donors | 0.643810447309487 | bayes_pls_golite062009 |
| protein binding | 0.370064403093958 | bayes_pls_golite062009 |
| NADPH-adrenodoxin reductase activity | 0.23045510393832 | bayes_pls_golite062009 |
| nucleic acid binding | 0.162130833238942 | bayes_pls_golite062009 |
| dihydrolipoyl dehydrogenase activity | 0.130601418359425 | bayes_pls_golite062009 |
| amine oxidase activity | 0.0576694782267841 | bayes_pls_golite062009 |
| DNA binding | 0.022476246602636 | bayes_pls_golite062009 |
|
Region A: Residues: [460-560] |
1 11 21 31 41 51
| | | | | |
1 AKKHKDEAKE YNMPLDVLIP LVYAMDYEMT AKPVDFFVRR RGAVFFNIHW VYEWKEAVIN 60
61 YMAAKLGWSK EEQMKYTAEL EKALTDAVIP VDQQEHAAAL A
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.913 | 0.373 | glycerol-3-phosphate metabolic process | a.4.5 | "Winged helix" DNA-binding domain |
