| Protein: | gi|24350784, gi|... |
| Organism: | Shewanella oneidensis MR-1 |
| Length: | 552 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24350784, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
554.0 | [0..3] | [547..5] |
|
|
552.0 | [0..3] | [548..12] |
|
|
552.0 | [0..1] | [552..13] |
|
|
549.0 | [0..1] | [552..19] |
|
|
548.0 | [0..1] | [552..28] |
|
|
548.0 | [0..1] | [552..13] |
|
|
548.0 | [0..3] | [546..4] |
|
|
547.0 | [0..1] | [552..3] |
|
|
547.0 | [0..2] | [551..9] |
|
|
545.0 | [0..2] | [546..3] |
|
Region A: Residues: [1-552] |
1 11 21 31 41 51
| | | | | |
1 MIRGADAVIK VLAAHGVTTV FGYPGGAIMP IYDALYGSPV EHLLSRHEQG AAFAAVGYAR 60
61 ASGKTGVCFA TSGPGATNLI TSLADALLDS VPVVAITGQV STAVIGTDAF QEIDVLGMSL 120
121 SCTKHSFMVT DVNDLIPTLY QAFEIAASGR PGPVLVDIPK DIQIAHLEYR TPLLAVTNEP 180
181 QAEMSDINAA RALLAQAKQP MLYVGGGVGM AGAVDQLRDF INTTGMPSVA TLKGLGSIAH 240
241 GTPGYLGMLG MHGGKAANLA VQDCDLLVVA GARFDDRVTG RLATFANKAK VIHLDIDAAE 300
301 LGKLRQPDVA IAGDLRQIFP ALAMSLNITP WQVEVEHLAR KHQWDYQHPG SLIYAPAMLR 360
361 RLANKLPEDS VVCCDVGQHQ MWVAQHMWFR RPEDHLSSAG LGTMGFGLPA AIGAQVARPD 420
421 ATVVTVSGDG SFMMNVQELT TIKRRKLPVK ILLIDNQKLG MVKQWQQLFF EGRYSETDLS 480
481 DNPDFVQLAS AFDIPGRTIF SSDEVEEALT EMLAAKGPYL LHVAIDDAFN VWPLVPPGAS 540
541 NSDMMDEMEK QT
|
| Detection Method: |  |
| Confidence: | 142.0 |
| Match: | 1ybhA |
| Description: | Crystal structure of Arabidopsis thaliana Acetohydroxyacid synthase In Complex With A Sulfonylurea Herbicide Chlorimuron Ethyl |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| acetolactate synthase activity | 12.903449876837 | bayes_pls_golite062009 |
| transferase activity, transferring aldehyde or ketonic groups | 12.3239025230705 | bayes_pls_golite062009 |
| pyruvate dehydrogenase activity | 5.28857071459273 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | 5.21233670052586 | bayes_pls_golite062009 |
| pyruvate dehydrogenase (acetyl-transferring) activity | 5.08663245333808 | bayes_pls_golite062009 |
| transketolase activity | 2.50501741089295 | bayes_pls_golite062009 |
| catalytic activity | 2.25537597692103 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the aldehyde or oxo group of donors | 2.15444163802756 | bayes_pls_golite062009 |
| deoxyhypusine synthase activity | 2.04735838056767 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 1.98546381612935 | bayes_pls_golite062009 |
| thiamin pyrophosphate binding | 1.87247313698582 | bayes_pls_golite062009 |
| oxidoreductase activity | 1.85833680148029 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 1.82969293063325 | bayes_pls_golite062009 |
| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity | 1.65348126142808 | bayes_pls_golite062009 |
| protein deacetylase activity | 1.44717642297532 | bayes_pls_golite062009 |
| hydrolase activity | 1.43067365161346 | bayes_pls_golite062009 |
| histone deacetylase activity | 1.42361327659281 | bayes_pls_golite062009 |
| NAD-dependent histone deacetylase activity | 1.38386860396623 | bayes_pls_golite062009 |
| NAD-dependent protein deacetylase activity | 1.38386860396623 | bayes_pls_golite062009 |
| alpha-ketoacid dehydrogenase activity | 1.20517690263403 | bayes_pls_golite062009 |
| phenylpyruvate decarboxylase activity | 1.11553401986553 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 1.0611726850452 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on NADH or NADPH | 0.982646671777 | bayes_pls_golite062009 |
| binding | 0.980920092099572 | bayes_pls_golite062009 |
| transcription regulator activity | 0.872247149132548 | bayes_pls_golite062009 |
| nucleic acid binding | 0.798960981352585 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.78591260444574 | bayes_pls_golite062009 |
| DNA binding | 0.65003905101228 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.51426028502998 | bayes_pls_golite062009 |
| transferase activity | 0.413024577830522 | bayes_pls_golite062009 |
| deacetylase activity | 0.34210759801484 | bayes_pls_golite062009 |
| pyruvate decarboxylase activity | 0.198062360371269 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 0.114062221123972 | bayes_pls_golite062009 |
| transcription factor binding | 0.0144694403853303 | bayes_pls_golite062009 |
