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View Structure Prediction Details

Protein: gi|24374315, gi|...
Organism: Shewanella oneidensis MR-1
Length: 308 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24374315, gi|....

Description E-value Query
Range
Subject
Range
gi|113477277, gi... - gi|71673902|ref|ZP_00671650.1| Beta-ketoacyl synthase:Acyl transferase region:Phosphopantetheine-bin...
340.0 [0..3] [301..543]
gi|46486682 - gi|46486682|gb|AAS98783.1| JamL [Lyngbya majuscula]
340.0 [0..3] [301..580]
gi|25286570 - pir||G97338 malonyl CoA-acyl carrier protein transacylase [imported] - Clostridium acetobutylicum
gi|15896809, gi|... - gi|15896809|ref|NP_350158.1| acyl-carrier-protein S-malonyltransferase [Clostridium acetobutylicum A...
339.0 [0..1] [306..1]
gi|28807048 - gi|28807048|dbj|BAC60318.1| malonyl Coa-acyl carrier protein transacylase [Vibrio parahaemolyticus R...
gi|28898829, gi|... - gi|28898829|ref|NP_798434.1| acyl carrier protein S-malonyltransferase [Vibrio parahaemolyticus RIMD...
334.0 [0..1] [306..1]

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Predicted Domain #1
Region A:
Residues: [1-308]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENVAFVFPG QGSQALGMLA ELAAVQPIVG QTFAEASEVL GYDLWALVQD GPVETLNETD  60
   61 KTQPALLAAS VAIWRAYLAS GKAMPAVLAG HSLGEYSALV CAGVIDFKDA IKLVELRGQL 120
  121 MQQAVPAGTG AMYAIIGLDN DGIANACIEA AQGEVVSPVN FNSPGQVVIA GQKDAVERAA 180
  181 AACKASGAKM AVALPVSVPS HCALMKPAAD KLALALNNVQ FNAPSITVIN NVDVASPTAV 240
  241 ADIKDALVRQ LYCPVRWSET VELMAEKGIT QLVECGPGKV LTGLTKRINK SLSAQAVNDV 300
  301 ASLAALTE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 84.154902
Match: 1mlaA
Description: THE ESCHERICHIA COLI MALONYL-COA:ACYL CARRIER PROTEIN TRANSACYLASE AT 1.5-ANGSTROMS RESOLUTION. CRYSTAL STRUCTURE OF A FATTY ACID SYNTHASE COMPONENT
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
fatty acid synthase activity 3.8342776307652 bayes_pls_golite062009
[acyl-carrier-protein] S-malonyltransferase activity 3.22698755039732 bayes_pls_golite062009
S-malonyltransferase activity 3.22698755039732 bayes_pls_golite062009
malonyltransferase activity 3.22698755039732 bayes_pls_golite062009
S-acyltransferase activity 3.18367556561638 bayes_pls_golite062009
transferase activity, transferring acyl groups 2.43991449705536 bayes_pls_golite062009
phospholipase A2 activity 2.22630563405125 bayes_pls_golite062009
phospholipase activity 2.02363770793596 bayes_pls_golite062009
lipase activity 1.83391969295473 bayes_pls_golite062009
acyltransferase activity 1.78630082256331 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 1.72925527077131 bayes_pls_golite062009
catalytic activity 1.00294942392567 bayes_pls_golite062009
carboxylesterase activity 0.431665185524913 bayes_pls_golite062009
transferase activity 0.0452932406623609 bayes_pls_golite062009

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