Protein: | gi|24348316, gi|... |
Organism: | Shewanella oneidensis MR-1 |
Length: | 477 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24348316, gi|....
Description | E-value | Query Range |
Subject Range |
|
516.0 | [0..126] | [471..1] |
|
515.0 | [0..126] | [471..1] |
|
513.0 | [0..126] | [471..1] |
Region A: Residues: [1-121] |
1 11 21 31 41 51 | | | | | | 1 MSADKHLQSW QERFEMAEAM QPLLGKLYRN QGVEVVVYGK PLLNASTIEI IKAHRLVRRH 60 61 VGEKLRLRES FPFVQALSRL AVKQCKVDIG KLAVKYWAEH TDTNEIESYM ARELAAAIDH 120 121 A |
Detection Method: | |
Confidence: | 26.0 |
Match: | 2i9eA |
Description: | No description for 2i9eA was found. |
Region A: Residues: [122-477] |
1 11 21 31 41 51 | | | | | | 1 DDIAPRDVVL YGFGRIGRLL ARLLIERTGR SNKLRLRAIV LRGGKKGDLE KRASLLRRDS 60 61 VHGPFNGSVE VDEENNAIIA NGTYIQVIYA NSPDEVDYTK YGINDALVVD NTGIWKDEAG 120 121 LGLHLKSPGA SKVLLTAPAK GAIKNIVYGV NEGDITPEDI IVSAASCTTN AITPVLKAVN 180 181 DKYGIENGHV ETIHSYTNDQ NLIDNYHSAD RRGRSAPLNM VITETGAAKA VAKALPVLAG 240 241 KLTGNAIRVP TPNVSMAIIS MNLNAETNKD ELNEYLKDTA LQSPLQNQID YTDSTEIVSS 300 301 DLVGSRYAGV VDSQATIAEG KRAILYVWYD NEFGYSCQVV GVMQTMLGLT TLSLPA |
Detection Method: | |
Confidence: | 142.0 |
Match: | 1j0xO |
Description: | Crystal structure of the rabbit muscle glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
glyceraldehyde-3-phosphate dehydrogenase activity | 6.40381118887682 | bayes_pls_golite062009 |
glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity | 5.96956214078036 | bayes_pls_golite062009 |
oxidoreductase activity | 4.00402564572912 | bayes_pls_golite062009 |
1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 3.16750187025282 | bayes_pls_golite062009 |
oxidoreductase activity, acting on the aldehyde or oxo group of donors | 2.70673476015931 | bayes_pls_golite062009 |
catalytic activity | 2.54843319568228 | bayes_pls_golite062009 |
glucose-6-phosphate dehydrogenase activity | 2.2713146106379 | bayes_pls_golite062009 |
inositol-3-phosphate synthase activity | 2.2178883592085 | bayes_pls_golite062009 |
transcription regulator activity | 1.90939908578582 | bayes_pls_golite062009 |
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 1.66955978224275 | bayes_pls_golite062009 |
DNA binding | 1.61355789916908 | bayes_pls_golite062009 |
nucleic acid binding | 1.48478425318425 | bayes_pls_golite062009 |
hydrolase activity | 1.40468563568607 | bayes_pls_golite062009 |
binding | 1.22114607236074 | bayes_pls_golite062009 |
retinol dehydrogenase activity | 1.16811519855038 | bayes_pls_golite062009 |
oxidoreductase activity, acting on CH-OH group of donors | 1.11682034462164 | bayes_pls_golite062009 |
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1.03017667696669 | bayes_pls_golite062009 |
transcription factor activity | 0.91090893050278 | bayes_pls_golite062009 |
molecular transducer activity | 0.910536752370264 | bayes_pls_golite062009 |
signal transducer activity | 0.910536752370264 | bayes_pls_golite062009 |
alcohol dehydrogenase (NAD) activity | 0.88293430762998 | bayes_pls_golite062009 |
NAD or NADH binding | 0.74536049628503 | bayes_pls_golite062009 |
intramolecular lyase activity | 0.708206800759221 | bayes_pls_golite062009 |
monovalent inorganic cation transmembrane transporter activity | 0.527946013169731 | bayes_pls_golite062009 |
oxidoreductase activity, acting on the CH-CH group of donors | 0.41382905800454 | bayes_pls_golite062009 |
receptor activity | 0.388215697182664 | bayes_pls_golite062009 |
structural molecule activity | 0.345975336806588 | bayes_pls_golite062009 |
alcohol dehydrogenase activity, zinc-dependent | 0.331048046502169 | bayes_pls_golite062009 |
collagen binding | 0.30621400535957 | bayes_pls_golite062009 |
transmembrane receptor activity | 0.211380641599388 | bayes_pls_golite062009 |
NADPH:quinone reductase activity | 0.136079082491021 | bayes_pls_golite062009 |
glucose binding | 0.13030486887358 | bayes_pls_golite062009 |