Protein: | SHO1_YEAST |
Organism: | Saccharomyces cerevisiae S288c |
Length: | 367 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SHO1_YEAST.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..367] | [1..367] |
|
1.0E-86 | [21..361] | [20..354] |
|
2.0E-75 | [23..360] | [14..296] |
|
9.0E-60 | [23..360] | [3..386] |
|
6.0E-32 | [133..359] | [561..782] |
|
1.0E-28 | [144..358] | [331..544] |
|
2.0E-28 | [144..358] | [294..507] |
|
2.0E-28 | [132..359] | [879..1107] |
Region A: Residues: [1-253] |
1 11 21 31 41 51 | | | | | | 1 MSISSKIRPT PRKPSRMATD HSFKMKKFYA DPFAISSISL AIVSWVIAIG GSISSASTNE 60 61 SFPRFTWWGI VYQFLIICSL MLFYCFDLVD HYRIFITTSI AVAFVYNTNS ATNLVYADGP 120 121 KKAAASAGVI LLSIINLIWI LYYGGDNASP TNRWIDSFSI KGIRPSPLEN SLHRARRRGN 180 181 RNTTPYQNNV YNDAIRDSGY ATQFDGYPQQ QPSHTNYVSS TALAGFENTQ PNTSEAVNLH 240 241 LNTLQQRINS ASN |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [254-367] |
1 11 21 31 41 51 | | | | | | 1 AKETNDNSNN QTNTNIGNTF DTDFSNGNTE TTMGDTLGLY SDIGDDNFIY KAKALYPYDA 60 61 DDDDAYEISF EQNEILQVSD IEGRWWKARR ANGETGIIPS NYVQLIDGPE EMHR |
Detection Method: | |
Confidence: | 76.38764 |
Match: | 1g83A_ |
Description: | Fyn proto-oncogene tyrosine kinase, SH3 domain; Tyrosine kinase Fyn |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 2.42916850671495 | bayes_pls_golite062009 |
protein binding | 2.08632303609243 | bayes_pls_golite062009 |
cytoskeletal protein binding | 1.69497236763657 | bayes_pls_golite062009 |
signal transducer activity | 1.34867629228264 | bayes_pls_golite062009 |
molecular transducer activity | 1.34867629228264 | bayes_pls_golite062009 |
actin binding | 0.75725452085414 | bayes_pls_golite062009 |
receptor binding | 0.351326788023913 | bayes_pls_golite062009 |