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View Structure Prediction Details

Protein: gi|42567964, gi|...
Organism: Arabidopsis thaliana
Length: 681 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42567964, gi|....

Description E-value Query
Range
Subject
Range
gi|76674964 - gi|76674964|ref|XP_582226.2| PREDICTED: similar to folate hydrolase 1 isoform 1 [Bos taurus]
538.0 [0..2] [679..143]

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Predicted Domain #1
Region A:
Residues: [1-681]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKSKSLAFV IAALSYSFFS LFSSPPKSHY HELFISTSFS DNASVALNLH TLTRRPHVAG  60
   61 TVANAEAAEY VRSVFTSSAL KSHVVAYQVS LTYPVHRSLV LTPTDSAKPI TFLLEQEKLG 120
  121 DNPYANEVMP TFHGYAKSGN VSGPVVYANY GRVEDFVRLK KDMGVNVSGA VVIARYGQIY 180
  181 RGDIVKNAYE AGAVGVVIYT DKRDYGGDEW FPASKWMPPS GVQVGTVYNG LGDPTTPGWA 240
  241 SVDGCERLSD EAVELSGDVP LIPSLPVSAA DAEVILKTVV GDVSDGDVYP VGPGPGVLNL 300
  301 SYIGETVIAK IENVIGVIEG EEEPDRYVIL GNHRDAWTFG AVDPNSGTAV LMEIAQRLDK 360
  361 LQKRGWKPRR TIILCNWDAE EYGLIGSTEW VEENREMLSS RAVAYLNVDC AVSGPGFHAS 420
  421 ATPQLDELIK VAAQEVRDPD NATQTIYESW IGSSDSVVIR RLGGGGSDYA SFVQHVGVPG 480
  481 VDMSFGRGYP VYHSMYDDFT WMEKFGDPMF QRHVAMASVL GLVALRLADE EIIPFNYTSY 540
  541 ALELKKSAED LENEKLGHNI DVSTLIKSIE DLSTAAKHIS LEKEAIKGAL KVRELNDRLM 600
  601 MAERALTDRD GLSERPWYKH LIYGPSKYDD YGSKSFPGVD DAIDNAKKLN TKASWENVQH 660
  661 QIWRVSRAIR HASLVLKGEL I

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 149.0
Match: 2ootA
Description: No description for 2ootA was found.

Predicted functions:

Term Confidence Notes
peptidase activity 4.786910294594 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 4.40766568731738 bayes_pls_golite062009
transferrin receptor activity 4.23222910697724 bayes_pls_golite062009
hydrolase activity 2.98013991489506 bayes_pls_golite062009
exopeptidase activity 2.85109457647548 bayes_pls_golite062009
metallopeptidase activity 2.76103081380105 bayes_pls_golite062009
transmembrane receptor activity 2.66431152897721 bayes_pls_golite062009
receptor activity 2.50668975998057 bayes_pls_golite062009
molecular transducer activity 2.43554678928141 bayes_pls_golite062009
signal transducer activity 2.43554678928141 bayes_pls_golite062009
metalloexopeptidase activity 1.76058821499096 bayes_pls_golite062009
catalytic activity 1.3989281287879 bayes_pls_golite062009
metal ion transmembrane transporter activity 1.17701344924757 bayes_pls_golite062009
metallocarboxypeptidase activity 1.15035221474504 bayes_pls_golite062009
binding 1.13031326446259 bayes_pls_golite062009
endopeptidase activity 0.910234727191613 bayes_pls_golite062009
carboxypeptidase activity 0.891655769761122 bayes_pls_golite062009
ion transmembrane transporter activity 0.763081363039738 bayes_pls_golite062009
cation transmembrane transporter activity 0.725998533127902 bayes_pls_golite062009
serine hydrolase activity 0.596149133958797 bayes_pls_golite062009
serine-type peptidase activity 0.578572340123331 bayes_pls_golite062009
nucleic acid binding 0.328807457631995 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 0.183113991997707 bayes_pls_golite062009
transcription regulator activity 0.175639750716837 bayes_pls_golite062009
transition metal ion binding 0.140027513499495 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 0.103908874877312 bayes_pls_golite062009
aminopeptidase activity 0.0966237570696103 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle