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View Structure Prediction Details

Protein: GALAK_ARATH
Organism: Arabidopsis thaliana
Length: 424 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GALAK_ARATH.

Description E-value Query
Range
Subject
Range
GAL1_CALS4 - Galactokinase OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / ...
GAL1_THETN - Galactokinase OS=Thermoanaerobacter tengcongensis GN=galK PE=3 SV=1
353.0 [0..11] [422..4]

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Predicted Domain #1
Region A:
Residues: [1-424]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWPTDSELN SIKEAVAQMS GRDKGEVRVV VAPYRICPLG AHIDHQGGTV SAMTINKGIL  60
   61 LGFVPSGDTQ VQLRSAQFEG EVCFRVDEIQ HPIGLANKNG ASTPSPSKEK SIWGTYARGA 120
  121 VYALQSSKKN LKQGIIGYLS GSNGLDSSGL SSSAAVGVAY LLALENANEL TVSPTENIEY 180
  181 DRLIENGYLG LRNGILDQSA ILLSNYGCLT YMDCKTLDHE LVQAPELEKP FRILLAFSGL 240
  241 RQALTTNPGY NLRVSECQEA AKVLLTASGN SELEPTLCNV EHAVYEAHKH ELKPVLAKRA 300
  301 EHYFSENMRV IKGREAWASG NLEEFGKLIS ASGLSSIENY ECGAEPLIQL YKILLKAPGV 360
  361 YGARFSGAGF RGCCLAFVDA EKAEAAASYV KDEYEKAQPE FANNLNGGKP VLICEAGDAA 420
  421 RVLL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 89.522879
Match: 1wuuA
Description: crystal structure of human galactokinase complexed with MgAMPPNP and galactose
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
galactokinase activity 1.98579505313408 bayes_pls_golite062009
catalytic activity 0.836142537655721 bayes_pls_golite062009
hydrolase activity 0.740929677099368 bayes_pls_golite062009
nuclease activity 0.658641254758609 bayes_pls_golite062009
binding 0.608774560880549 bayes_pls_golite062009
ribonuclease activity 0.545200648734771 bayes_pls_golite062009
galactose binding 0.199740558600278 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle