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View Structure Prediction Details

Protein: gi|221321336
Organism: Bacillus subtilis subsp. subtilis str. SMY
Length: 488 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221321336.

Description E-value Query
Range
Subject
Range
gi|166853413, gi... - gi|167039173|ref|YP_001662158.1| response regulator receiver protein [Thermoanaerobacter sp. X514], ...
gi|167038115, gi... - gi|76796702|ref|ZP_00779057.1| IMP dehydrogenase [Thermoanaerobacter ethanolicus ATCC 33223], gi|765...
gi|241902681, gi... - gi|241902681|ref|ZP_04787413.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter brockii s...
489.0 [0..2] [487..1]

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Predicted Domain #1
Region A:
Residues: [1-488]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWESKFSKEG LTFDDVLLVP AKSEVLPRDV DLSVELTKTL KLNIPVISAG MDTVTESAMA  60
   61 IAMARQGGLG IIHKNMSIEQ QAEQVDKVKR SERGVITNPF FLTPDHQVFD AEHLMGKYRI 120
  121 SGVPIVNNEE DQKLVGIITN RDLRFISDYS MKISDVMTKE ELVTASVGTT LDEAEKILQK 180
  181 HKIEKLPLVD DQNKLKGLIT IKDIEKVIEF PNSSKDIHGR LIVGAAVGVT GDTMTRVKKL 240
  241 VEANVDVIVI DTAHGHSQGV LNTVTKIRET YPELNIIAGN VATAEATRAL IEAGADVVKV 300
  301 GIGPGSICTT RVVAGVGVPQ ITAIYDCATE ARKHGKTIIA DGGIKFSGDI TKALAAGGHA 360
  361 VMLGSLLAGT SESPGETEIY QGRRFKVYRG MGSVAAMEKG SKDRYFQEEN KKFVPEGIEG 420
  421 RTPYKGPVEE TVYQLVGGLR SGMGYCGSKD LRALREEAQF IRMTGAGLRE SHPHDVQITK 480
  481 ESPNYTIS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 124.0
Match: 1zfjA
Description: Inosine monophosphate dehydrogenase (IMPDH); Type II inosine monophosphate dehydrogenase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
IMP dehydrogenase activity 2.02048863053452 bayes_pls_golite062009
binding 0.964202692685807 bayes_pls_golite062009
transporter activity 0.961062314616209 bayes_pls_golite062009
transmembrane transporter activity 0.807029018941177 bayes_pls_golite062009
substrate-specific transporter activity 0.640881170978843 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.525366315833255 bayes_pls_golite062009
ion transmembrane transporter activity 0.440262824681055 bayes_pls_golite062009
protein binding 0.22179604283012 bayes_pls_golite062009
catalytic activity 0.181756622780318 bayes_pls_golite062009
di-, tri-valent inorganic cation transmembrane transporter activity 0.0973526732376297 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle