| Protein: | gi|190690795, gi... |
| Organism: | synthetic construct |
| Length: | 609 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190690795, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..609] | [1..609] |
|
|
0.0 | [1..609] | [1..609] |
|
|
0.0 | [1..609] | [1..609] |
|
|
0.0 | [1..608] | [1..606] |
|
|
0.0 | [1..608] | [1..606] |
|
Region A: Residues: [1-609] |
1 11 21 31 41 51
| | | | | |
1 MSGWESYYKT EGDEEAEEEQ EENLEASGDY KYSGRDSLIF LVDASKAMFE SQSEDELTPF 60
61 DMSIQCIQSV YISKIISSDR DLLAVVFYGT EKDKNSVNFK NIYVLQELDN PGAKRILELD 120
121 QFKGQQGQKR FQDMMGHGSD YSLSEVLWVC ANLFSDVQFK MSHKRIMLFT NEDNPHGNDS 180
181 AKASRARTKA GDLRDTGIFL DLMHLKKPGG FDISLFYRDI ISIAEDEDLR VHFEESSKLE 240
241 DLLRKVRAKE TRKRALSRLK LKLNKDIVIS VGIYNLVQKA LKPPPIKLYR ETNEPVKTKT 300
301 RTFNTSTGGL LLPSDTKRSQ IYGSRQIILE KEETEELKRF DDPGLMLMGF KPLVLLKKHH 360
361 YLRPSLFVYP EESLVIGSST LFSALLIKCL EKEVAALCRY TPRRNIPPYF VALVPQEEEL 420
421 DDQKIQVTPP GFQLVFLPFA DDKRKMPFTE KIMATPEQVG KMKAIVEKLR FTYRSDSFEN 480
481 PVLQQHFRNL EALALDLMEP EQAVDLTLPK VEAMNKRLGS LVDEFKELVY PPDYNPEGKV 540
541 TKRKHDNEGS GSKRPKVEYS EEELKTHISK GTLGKFTVPM LKEACRAYGL KSGLKKQELL 600
601 EALTKHFQD
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1jeqA |
| Description: | DNA binding C-terminal domain of ku70; Ku70 subunit |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| double-stranded telomeric DNA binding | 8.64621483095491 | bayes_pls_golite062009 |
| DNA-dependent protein kinase activity | 7.33495559751688 | bayes_pls_golite062009 |
| telomeric DNA binding | 5.16364366157397 | bayes_pls_golite062009 |
| transcription regulator activity | 3.05720838352689 | bayes_pls_golite062009 |
| promoter binding | 3.01492777192913 | bayes_pls_golite062009 |
| transcription activator activity | 2.87080577911324 | bayes_pls_golite062009 |
| binding | 2.75824485094584 | bayes_pls_golite062009 |
| protein binding | 2.58357303743968 | bayes_pls_golite062009 |
| nucleic acid binding | 2.08531850924748 | bayes_pls_golite062009 |
| DNA binding | 1.91667917801679 | bayes_pls_golite062009 |
| transcription factor activity | 1.37299910766941 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.985753648509262 | bayes_pls_golite062009 |
| protein complex binding | 0.94234534987624 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.914051610867509 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.814975395718076 | bayes_pls_golite062009 |
| protein dimerization activity | 0.73404855126602 | bayes_pls_golite062009 |
| DNA helicase activity | 0.720743494912414 | bayes_pls_golite062009 |
| protein heterodimerization activity | 0.64812784969409 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 0.506640285146188 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.450760554291027 | bayes_pls_golite062009 |
| structural molecule activity | 0.375125487765613 | bayes_pls_golite062009 |
| receptor binding | 0.234020194580985 | bayes_pls_golite062009 |
| transcription factor binding | 0.184852480703492 | bayes_pls_golite062009 |
| protein C-terminus binding | 0.15516806759612 | bayes_pls_golite062009 |
| identical protein binding | 0.125363466534611 | bayes_pls_golite062009 |
| collagen binding | 0.113837148027681 | bayes_pls_golite062009 |
| transcription repressor activity | 0.0660601071978013 | bayes_pls_golite062009 |
