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View Structure Prediction Details

Protein: gi|63147412, gi|...
Organism: Arabidopsis thaliana
Length: 301 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|63147412, gi|....

Description E-value Query
Range
Subject
Range
gi|45681510, gi|... - ref|ZP_00192950.1| COG5265: ABC-type transport system involved in Fe-S cluster assembly, permease an...
257.0 [0..2] [277..298]

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Predicted Domain #1
Region A:
Residues: [1-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVSSFSTVP RYCNSRSFVP ELSRFRGFKV HLWDQSLVPL HFSIRKRKNT PRYLISCSQK  60
   61 KDVTVVDGSC MDEIYDKLAE RLVPTAAAMF SPNLKRLVGL AGPPGAGKST VANEVVRRVN 120
  121 KLWPQKAASF DAEVNPPDVA IVLPMDGFHL YRSQLDAMED PKEAHARRGA PWTFDPALLL 180
  181 NCLKKLKNEG SVYVPSFDHG VGDPVEDDIF VSLQHKVVIV EGNYILLEEG SWKDISDMFD 240
  241 EKWFIDVNLD TAMQRVENRH ISTGKPPDVA KWRVDYNDRP NAELIIKSKT NADLLIRSMN 300
  301 I

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Detection Method: PSI-BLAST
Confidence: 60.69897
Match: 2hydA
Description: No description for 2hydA was found.

Predicted functions:

Term Confidence Notes
binding 1.89648142312455 bayes_pls_golite062009
nucleic acid binding 1.08697924060619 bayes_pls_golite062009
catalytic activity 1.00104173493322 bayes_pls_golite062009
DNA binding 0.702147676354075 bayes_pls_golite062009
hydrolase activity 0.420858111948277 bayes_pls_golite062009
transcription regulator activity 0.287777990975748 bayes_pls_golite062009
nucleobase, nucleoside, nucleotide kinase activity 0.12351419478929 bayes_pls_golite062009
helicase activity 0.0775311459068899 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle