YRC Public Data Repository

Run Information:

Bait Protein:	VAM3
Organism:	Saccharomyces cerevisiae
Publication:	Hao Xu , Youngsoo Jun, James Thompson, John Yates and William Wickner (2010) HOPS Prevents the Disassembly of Trans-SNARE Complexes by Sec17p/Sec18p during Membrane Fusion [In Press]
Comments:	sample: hx1
Raw Data:	Download DTASelect Filter text Download DTASelect HTML file

UNFILTERED Run Results: [filter] [View our MS interpretation guidelines.]
	Hit Protein	Protein Desc	Sequence Count	Spectrum Count	Sequence Coverage	NSAF	Mol. Wt.
[View Peptides]	SEC17	Peripheral membrane protein required for vesicular transport between ER and Golgi, the 'priming' ste...	13	37	44.5%	0.0858	32803
[View Peptides]	KRT10	keratin 10	23	78	39.0%	0.089	59519
[View Peptides]	Contaminant_KERA...		34	93	35.9%	0.0979	65494
[View Peptides]	Contaminant_KERA...		19	28	35.7%	0.0402	51531
[View Peptides]	contaminant_KERA...		23	52	33.3%	0.0626	59822
[View Peptides]	gi\|2119236, gi\|4...	sp\|P35527\|K1CI_HUMAN Keratin, type I cytoskeletal 9 (Cytokeratin 9) (K9) (CK 9), gi\|545257\|gb\|AAC60...	26	68	32.5%	0.074	61987
[View Peptides]	contaminant_KERA...		18	24	32.4%	0.0346	50499
[View Peptides]	NYV1	v-SNARE component of the vacuolar SNARE complex involved in vesicle fusion; inhibits ATP-dependent C...	5	6	30.0%	0.0161	28964
[View Peptides]	KRT2	keratin 2	22	54	29.3%	0.0567	65865
[View Peptides]	VAM7	Component of the vacuole SNARE complex involved in vacuolar morphogenesis; SNAP-25 homolog; function...	8	18	27.5%	0.0386	36711
[View Peptides]	VTI1	Protein involved in cis-Golgi membrane traffic; v-SNARE that interacts with two t-SNARES, Sed5p and ...	5	13	26.7%	0.0406	24668
[View Peptides]	RPP2A	Ribosomal protein P2 alpha, a component of the ribosomal stalk, which is involved in the interaction...	2	2	24.5%	0.0128	10746
[View Peptides]	RPP2B	Ribosomal protein P2 beta, a component of the ribosomal stalk, which is involved in the interaction ...	2	2	23.6%	0.0123	11050
[View Peptides]	KRT5	keratin 5	16	37	23.4%	0.0425	62461
[View Peptides]	RPL36B	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl36Ap and has similari...	2	2	22.0%	0.0135	11135
[View Peptides]	RPL36A	N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to ...	2	2	22.0%	0.0135	11124
[View Peptides]	VAM3	Syntaxin-related protein required for vacuolar assembly; functions with Vam7p in vacuolar protein tr...	5	15	18.4%	0.0359	32498
[View Peptides]	LYSC_LYSEN	Lysyl endopeptidase OS=Lysobacter enzymogenes PE=1 SV=1	7	8	18.2%	0.0201	27961
[View Peptides]	KRT17	keratin 17	8	10	17.6%	0.0157	47974
[View Peptides]	PHO8	Repressible alkaline phosphatase, a glycoprotein localized to the vacuole; regulated by levels of in...	6	6	15.9%	0.00718	63004
[View Peptides]	contaminant_KERA...	isb\|A33652\|A33652\|probable keratin 16, type I, pseudogene - human	10	19	14.2%	0.0272	50915
[View Peptides]	YKT6	Vesicle membrane protein (v-SNARE) with acyltransferase activity; involved in trafficking to and wit...	2	2	13.0%	0.00677	22707
[View Peptides]	RPL4A	N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to ...	3	4	12.4%	0.00748	39092
[View Peptides]	RPL4B	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl4Ap and has similarit...	3	4	12.4%	0.00748	39062
[View Peptides]	SSA2	ATP binding protein involved in protein folding and vacuolar import of proteins; member of heat shoc...	5	5	12.1%	0.0053	69470
[View Peptides]	ROT1	Molecular chaperone involved in protein folding in the ER; mutation causes defects in cell wall synt...	2	2	12.1%	0.00529	28908
[View Peptides]	KRT19	keratin 19	7	9	11.8%	0.0152	44106
[View Peptides]	CDC19	Pyruvate kinase, functions as a homotetramer in glycolysis to convert phosphoenolpyruvate to pyruvat...	4	4	11.6%	0.00542	54545
[View Peptides]	RPS6A, RPS6B	Protein component of the small (40S) ribosomal subunit; identical to Rps6Bp and has similarity to ra...	2	2	11.4%	0.00574	26996
[View Peptides]	KRT3	keratin 3	8	38	9.9%	0.0409	64511
[View Peptides]	RPL8B	Ribosomal protein L4 of the large (60S) ribosomal subunit, nearly identical to Rpl8Ap and has simila...	2	3	9.0%	0.00793	28112
[View Peptides]	RPL8A	Ribosomal protein L4 of the large (60S) ribosomal subunit, nearly identical to Rpl8Bp and has simila...	2	3	9.0%	0.00793	28125
[View Peptides]	SHM2	Cytosolic serine hydroxymethyltransferase, converts serine to glycine plus 5,10 methylenetetrahydrof...	3	3	8.7%	0.00433	52219
[View Peptides]	PHO84	High-affinity inorganic phosphate (Pi) transporter and low-affinity manganese transporter; regulated...	3	3	8.0%	0.00346	64382
[View Peptides]	VPH1	Subunit a of vacuolar-ATPase V0 domain, one of two isoforms (Vph1p and Stv1p); Vph1p is located in V...	4	4	7.3%	0.00322	95529
[View Peptides]	gi\|34033, gi\|71526	pir\|\|KRHU3 keratin 13, type I, cytoskeletal, long splice form - human, gi\|34033\|emb\|CAA32786.1\| ker...	4	9	7.0%	0.0133	49644
[View Peptides]	PDA1	E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, catalyzes the direct oxidative decarbo...	2	2	6.4%	0.00322	46343
[View Peptides]	KAR2	ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding i...	2	2	4.5%	0.00199	74468
[View Peptides]	VTC4	Vacuolar membrane polyphosphate polymerase; subunit of the vacuolar transporter chaperone (VTC) comp...	3	3	4.2%	0.00282	83155
[View Peptides]	RGA1	GTPase-activating protein for the polarity-establishment protein Cdc42p; implicated in control of se...	2	2	4.0%	0.00134	112831
[View Peptides]	Contaminant_KERA...		2	9	3.9%	0.0114	57265
[View Peptides]	VAM6	Vacuolar protein that plays a critical role in the tethering steps of vacuolar membrane fusion by fa...	2	2	3.3%	0.00129	122881
[View Peptides]	YCF1	Vacuolar glutathione S-conjugate transporter of the ATP-binding cassette family, has a role in detox...	3	3	3.0%	0.00134	171120

View Mass Spectrometry Run