From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.732088722825] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
CDA1 |
|
|
|
CDA2 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
chitosan layer of spore wall | 5.0527E-8 | 2 | 2 | 2 | 6292 |
external encapsulating structure part | 3.0316E-7 | 2 | 4 | 2 | 6292 |
cell wall part | 3.0316E-7 | 2 | 4 | 2 | 6292 |
spore wall | 2.2737E-6 | 2 | 10 | 2 | 6292 |
ascospore wall | 2.2737E-6 | 2 | 10 | 2 | 6292 |
fungal-type cell wall | 2.7588E-4 | 2 | 105 | 2 | 6292 |
cell wall | 2.8118E-4 | 2 | 106 | 2 | 6292 |
external encapsulating structure | 2.8118E-4 | 2 | 106 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
chitin deacetylase activity | 5.0527E-8 | 2 | 2 | 2 | 6292 |
deacetylase activity | 3.0063E-5 | 2 | 35 | 2 | 6292 |
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 5.6994E-5 | 2 | 48 | 2 | 6292 |
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 1.5966E-4 | 2 | 80 | 2 | 6292 |