| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.754649006131] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| protein serine/threonine phosphatase complex | 6.8716E-6 | 2 | 17 | 2 | 6292 |
| calcineurin complex | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| protein phosphatase type 2A complex | 1.9064E-3 | 2 | 6 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| protein serine/threonine phosphatase activity | 1.6421E-5 | 2 | 26 | 2 | 6292 |
| phosphoprotein phosphatase activity | 4.5626E-5 | 2 | 43 | 2 | 6292 |
| metal ion binding | 7.5032E-5 | 2 | 55 | 2 | 6292 |
| ion binding | 7.7811E-5 | 2 | 56 | 2 | 6292 |
| cation binding | 7.7811E-5 | 2 | 56 | 2 | 6292 |
| phosphatase activity | 1.8902E-4 | 2 | 87 | 2 | 6292 |
| phosphoric ester hydrolase activity | 2.6026E-4 | 2 | 102 | 2 | 6292 |
| calcium-dependent protein serine/threonine phosphatase activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| calcium ion binding | 2.224E-3 | 2 | 7 | 1 | 6292 |
| hydrolase activity, acting on ester bonds | 2.929E-3 | 2 | 341 | 2 | 6292 |