| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.052] [SVM Score: 0.80414260281] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| microtubule cytoskeleton | 2.8118E-4 | 2 | 106 | 2 | 6292 |
| cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
| cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
| spindle microtubule | 5.3968E-3 | 2 | 17 | 1 | 6292 |
| microtubule associated complex | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| microtubule | 9.8303E-3 | 2 | 31 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| C-terminal protein lipidation | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| peptide or protein carboxyl-terminal blocking | 1.9064E-3 | 2 | 6 | 1 | 6292 |
| microtubule nucleation | 7.2981E-3 | 2 | 23 | 1 | 6292 |
| mitotic spindle organization in nucleus | 8.248E-3 | 2 | 26 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| microtubule binding | 2.2737E-6 | 2 | 10 | 2 | 6292 |
| tubulin binding | 9.6001E-6 | 2 | 20 | 2 | 6292 |
| cytoskeletal protein binding | 8.6451E-5 | 2 | 59 | 2 | 6292 |
| cysteine-type endopeptidase activity | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| protein binding | 9.4468E-3 | 2 | 612 | 2 | 6292 |