From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.845372618058] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
AME1 |
|
|
|
KAR3 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
microtubule organizing center | 9.8679E-5 | 2 | 63 | 2 | 6292 |
spindle pole body | 9.8679E-5 | 2 | 63 | 2 | 6292 |
spindle pole | 1.151E-4 | 2 | 68 | 2 | 6292 |
spindle | 1.9786E-4 | 2 | 89 | 2 | 6292 |
microtubule cytoskeleton | 2.8118E-4 | 2 | 106 | 2 | 6292 |
cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
COMA complex | 1.5888E-3 | 2 | 5 | 1 | 6292 |
microtubule | 9.8303E-3 | 2 | 31 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
chromosome segregation | 4.1068E-4 | 2 | 128 | 2 | 6292 |
microtubule anchoring | 9.5344E-4 | 2 | 3 | 1 | 6292 |
attachment of spindle microtubules to chromosome | 9.5344E-4 | 2 | 3 | 1 | 6292 |
attachment of spindle microtubules to kinetochore | 9.5344E-4 | 2 | 3 | 1 | 6292 |
karyogamy involved in conjugation with cellular fusion | 5.7138E-3 | 2 | 18 | 1 | 6292 |
karyogamy | 5.7138E-3 | 2 | 18 | 1 | 6292 |
mitotic sister chromatid cohesion | 7.2981E-3 | 2 | 23 | 1 | 6292 |
maintenance of protein location in cell | 7.9314E-3 | 2 | 25 | 1 | 6292 |
maintenance of protein location | 8.248E-3 | 2 | 26 | 1 | 6292 |
maintenance of location in cell | 8.5646E-3 | 2 | 27 | 1 | 6292 |
maintenance of location | 8.8811E-3 | 2 | 28 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
microtubule motor activity | 3.1764E-3 | 2 | 10 | 1 | 6292 |
motor activity | 5.7138E-3 | 2 | 18 | 1 | 6292 |