From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.04] [SVM Score: 0.462762769102] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
CNM67 |
|
|
|
KAR3 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
microtubule organizing center | 9.8679E-5 | 2 | 63 | 2 | 6292 |
spindle pole body | 9.8679E-5 | 2 | 63 | 2 | 6292 |
spindle pole | 1.151E-4 | 2 | 68 | 2 | 6292 |
spindle | 1.9786E-4 | 2 | 89 | 2 | 6292 |
microtubule cytoskeleton | 2.8118E-4 | 2 | 106 | 2 | 6292 |
cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
outer plaque of spindle pole body | 1.9064E-3 | 2 | 6 | 1 | 6292 |
microtubule organizing center part | 5.0798E-3 | 2 | 16 | 1 | 6292 |
microtubule | 9.8303E-3 | 2 | 31 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
mitotic cell cycle | 1.6363E-3 | 2 | 255 | 2 | 6292 |
M phase | 2.1762E-3 | 2 | 294 | 2 | 6292 |
cell cycle phase | 3.5621E-3 | 2 | 376 | 2 | 6292 |
karyogamy involved in conjugation with cellular fusion | 5.7138E-3 | 2 | 18 | 1 | 6292 |
karyogamy | 5.7138E-3 | 2 | 18 | 1 | 6292 |
cell cycle process | 6.0534E-3 | 2 | 490 | 2 | 6292 |
cell cycle | 6.95E-3 | 2 | 525 | 2 | 6292 |
microtubule nucleation | 7.2981E-3 | 2 | 23 | 1 | 6292 |
mitotic sister chromatid cohesion | 7.2981E-3 | 2 | 23 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
microtubule motor activity | 3.1764E-3 | 2 | 10 | 1 | 6292 |
motor activity | 5.7138E-3 | 2 | 18 | 1 | 6292 |