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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Pwp1. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mitochondrial inner membrane 4.3982E-3 4 174 2 6292
organelle inner membrane 4.9618E-3 4 185 2 6292
mitochondrial respiratory chain complex III 6.3436E-3 4 10 1 6292
respiratory chain complex III 6.3436E-3 4 10 1 6292
nucleolus 6.4227E-3 4 211 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mitochondrial electron transport, ubiquinol to cytochrome c 5.7106E-3 4 9 1 6292
tetrapyrrole biosynthetic process 8.2408E-3 4 13 1 6292
heme biosynthetic process 8.2408E-3 4 13 1 6292
porphyrin biosynthetic process 8.2408E-3 4 13 1 6292
tetrapyrrole metabolic process 9.5041E-3 4 15 1 6292
porphyrin metabolic process 9.5041E-3 4 15 1 6292
heme metabolic process 9.5041E-3 4 15 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

5S rRNA binding 1.2712E-3 4 2 1 6292
ferrochelatase activity 1.2712E-3 4 2 1 6292
rRNA primary transcript binding 3.1756E-3 4 5 1 6292
oxidoreductase activity, acting on diphenols and related substances as donors 5.7106E-3 4 9 1 6292
ubiquinol-cytochrome-c reductase activity 5.7106E-3 4 9 1 6292
oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor 5.7106E-3 4 9 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle