From Publication: | Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3. |
Notes: | This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Ino4. The topolgies of protein complexes in this experiment are unknown. |
Complex Size: | 8 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
nuclear nucleosome | 2.953E-7 | 8 | 12 | 3 | 6292 |
nucleosome | 2.953E-7 | 8 | 12 | 3 | 6292 |
protein-DNA complex | 3.8233E-5 | 8 | 57 | 3 | 6292 |
nuclear chromatin | 8.0492E-5 | 8 | 73 | 3 | 6292 |
chromatin | 9.4442E-5 | 8 | 77 | 3 | 6292 |
nuclear chromosome part | 1.357E-3 | 8 | 190 | 3 | 6292 |
nuclear chromosome | 2.2974E-3 | 8 | 228 | 3 | 6292 |
replication fork protection complex | 2.5415E-3 | 8 | 2 | 1 | 6292 |
chromosomal part | 2.5676E-3 | 8 | 237 | 3 | 6292 |
chromosome | 3.8858E-3 | 8 | 274 | 3 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
chromatin assembly or disassembly | 8.6654E-6 | 8 | 35 | 3 | 6292 |
histone H3-K79 methylation | 1.2715E-3 | 8 | 1 | 1 | 6292 |
chromatin organization | 1.6437E-3 | 8 | 203 | 3 | 6292 |
histone lysine methylation | 2.5415E-3 | 8 | 2 | 1 | 6292 |
positive regulation of transcription | 8.1985E-3 | 8 | 112 | 2 | 6292 |
positive regulation of gene expression | 8.1985E-3 | 8 | 112 | 2 | 6292 |
positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | 9.0698E-3 | 8 | 118 | 2 | 6292 |
positive regulation of nitrogen compound metabolic process | 9.0698E-3 | 8 | 118 | 2 | 6292 |
positive regulation of macromolecule biosynthetic process | 9.0698E-3 | 8 | 118 | 2 | 6292 |
positive regulation of biosynthetic process | 9.5206E-3 | 8 | 121 | 2 | 6292 |
positive regulation of cellular biosynthetic process | 9.5206E-3 | 8 | 121 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
DNA binding | 1.6466E-4 | 8 | 256 | 4 | 6292 |
nucleic acid binding | 5.58E-4 | 8 | 666 | 5 | 6292 |
binding | 1.4278E-3 | 8 | 1294 | 6 | 6292 |