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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Bfa1. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

trans-Golgi network 8.2408E-3 4 13 1 6292
integral to membrane 9.2992E-3 4 255 2 6292
intrinsic to membrane 9.8029E-3 4 262 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

peptide pheromone maturation 1.0898E-5 4 9 2 6292
protein maturation 2.3456E-4 4 40 2 6292
low-affinity iron ion transport 6.3573E-4 4 1 1 6292
mitotic cell cycle spindle orientation checkpoint 2.5411E-3 4 4 1 6292
intracellular copper ion transport 3.1756E-3 4 5 1 6292
iron ion transmembrane transport 3.1756E-3 4 5 1 6292
copper ion transmembrane transport 3.8098E-3 4 6 1 6292
copper ion import 3.8098E-3 4 6 1 6292
copper ion transport 7.6087E-3 4 12 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

peptidase activity, acting on L-amino acid peptides 1.3271E-3 4 95 2 6292
serine-type endopeptidase activity 2.5411E-3 4 4 1 6292
copper ion transmembrane transporter activity 3.1756E-3 4 5 1 6292
serine-type peptidase activity 3.8098E-3 4 6 1 6292
peptidase activity 5.3374E-3 4 192 2 6292
iron ion transmembrane transporter activity 7.6087E-3 4 12 1 6292
serine hydrolase activity 8.2408E-3 4 13 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle