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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Ybr203w. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

RAVE complex 1.4299E-3 3 3 1 6292
CBF3 complex 1.9063E-3 3 4 1 6292
chromosomal part 4.1335E-3 3 237 2 6292
SCF ubiquitin ligase complex 5.2364E-3 3 11 1 6292
chromosome 5.5058E-3 3 274 2 6292
nuclear nucleosome 5.7116E-3 3 12 1 6292
nucleosome 5.7116E-3 3 12 1 6292
cullin-RING ubiquitin ligase complex 6.6614E-3 3 14 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein-DNA complex assembly 1.1188E-4 3 39 2 6292
M phase of mitotic cell cycle 1.2156E-3 3 128 2 6292
centromere complex assembly 1.4299E-3 3 3 1 6292
kinetochore assembly 1.4299E-3 3 3 1 6292
kinetochore organization 1.4299E-3 3 3 1 6292
cell division 1.5585E-3 3 145 2 6292
cellular macromolecular complex assembly 2.449E-3 3 182 2 6292
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process 3.3344E-3 3 7 1 6292
protein neddylation 3.3344E-3 3 7 1 6292
mitotic cell cycle 4.7773E-3 3 255 2 6292
cellular macromolecular complex subunit organization 4.9265E-3 3 259 2 6292
protein ubiquitination during ubiquitin-dependent protein catabolic process 5.2364E-3 3 11 1 6292
regulation of protein complex assembly 5.2364E-3 3 11 1 6292
macromolecular complex assembly 5.7868E-3 3 281 2 6292
M phase 6.3267E-3 3 294 2 6292
nucleosome assembly 7.6106E-3 3 16 1 6292
regulation of cellular component biogenesis 8.5592E-3 3 18 1 6292
chromatin assembly 9.0332E-3 3 19 1 6292
macromolecular complex subunit organization 9.2699E-3 3 357 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

DNA replication origin binding 6.1865E-3 3 13 1 6292
histone binding 6.6614E-3 3 14 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle