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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Prk1. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cell cortex 1.7442E-3 4 109 2 6292
cytoskeleton 6.7241E-3 4 216 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

regulation of endocytosis 9.0929E-7 4 3 2 6292
regulation of vesicle-mediated transport 4.5436E-6 4 6 2 6292
regulation of transport 1.6642E-5 4 11 2 6292
regulation of localization 1.6642E-5 4 11 2 6292
actin cytoskeleton organization 2.2273E-5 4 113 3 6292
actin filament-based process 2.4734E-5 4 117 3 6292
actin cortical patch assembly 2.7517E-5 4 14 2 6292
cortical actin cytoskeleton organization 3.1744E-5 4 15 2 6292
cortical cytoskeleton organization 3.1744E-5 4 15 2 6292
cytoskeleton organization 1.9015E-4 4 231 3 6292
regulation of cellular component organization 8.2831E-4 4 75 2 6292
organelle organization 1.0248E-3 4 1127 4 6292
endocytosis 1.1395E-3 4 88 2 6292
membrane invagination 1.2994E-3 4 94 2 6292
cellular component organization 3.9851E-3 4 1582 4 6292
cellular membrane organization 5.6697E-3 4 198 2 6292
membrane organization 5.6697E-3 4 198 2 6292
protein refolding 6.3436E-3 4 10 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein kinase activity 3.5467E-3 4 156 2 6292
phosphotransferase activity, alcohol group as acceptor 5.6697E-3 4 198 2 6292
kinase activity 7.0945E-3 4 222 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle