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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Rad53. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 9 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cohesin complex 8.5551E-3 9 6 1 6292
nuclear cohesin complex 8.5551E-3 9 6 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

chromatin assembly or disassembly 1.0561E-3 9 35 2 6292
DNA replication-dependent nucleosome organization 1.4304E-3 9 1 1 6292
chromatin disassembly 1.4304E-3 9 1 1 6292
nucleosome disassembly 1.4304E-3 9 1 1 6292
DNA replication-dependent nucleosome assembly 1.4304E-3 9 1 1 6292
protein-DNA complex disassembly 1.4304E-3 9 1 1 6292
chromatin organization 2.4071E-3 9 203 3 6292
deoxyribonucleoside triphosphate biosynthetic process 2.859E-3 9 2 1 6292
chromosome organization 5.2635E-3 9 555 4 6292
deoxyribonucleoside triphosphate metabolic process 5.7106E-3 9 4 1 6292
deoxyribonucleotide biosynthetic process 5.7106E-3 9 4 1 6292
malate metabolic process 5.7106E-3 9 4 1 6292
DNA replication-independent nucleosome organization 8.5551E-3 9 6 1 6292
DNA replication-independent nucleosome assembly 8.5551E-3 9 6 1 6292
deoxyribonucleotide metabolic process 8.5551E-3 9 6 1 6292
traversing start control point of mitotic cell cycle 8.5551E-3 9 6 1 6292
synaptonemal complex assembly 9.9746E-3 9 7 1 6292
synaptonemal complex organization 9.9746E-3 9 7 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

diamine N-acetyltransferase activity 1.4304E-3 9 1 1 6292
aralkylamine N-acetyltransferase activity 1.4304E-3 9 1 1 6292
inorganic diphosphatase activity 2.859E-3 9 2 1 6292
L-malate dehydrogenase activity 5.7106E-3 9 4 1 6292
malate dehydrogenase activity 7.1338E-3 9 5 1 6292
protein serine/threonine/tyrosine kinase activity 9.9746E-3 9 7 1 6292

YRC Informatics Platform - Version 3.0
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