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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

membrane fraction 1.2181E-3 4 91 2 6292
insoluble fraction 1.2181E-3 4 91 2 6292
cell fraction 2.436E-3 4 129 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

vacuolar transport 1.0596E-7 4 115 4 6292
protein targeting to vacuole 5.0107E-6 4 69 3 6292
phosphoinositide-mediated signaling 3.6271E-5 4 16 2 6292
inositol lipid-mediated signaling 3.6271E-5 4 16 2 6292
intracellular transport 5.908E-5 4 553 4 6292
establishment of localization in cell 8.1397E-5 4 599 4 6292
cellular localization 1.0815E-4 4 643 4 6292
second-messenger-mediated signaling 1.3109E-4 4 30 2 6292
protein targeting 2.0015E-4 4 235 3 6292
intracellular protein transport 2.5535E-4 4 255 3 6292
protein transport 2.9943E-4 4 269 3 6292
establishment of protein localization 3.0611E-4 4 271 3 6292
cellular protein localization 3.1631E-4 4 274 3 6292
cellular macromolecule localization 3.5193E-4 4 284 3 6292
protein localization 4.2667E-4 4 303 3 6292
transport 6.2722E-4 4 997 4 6292
establishment of localization 6.5541E-4 4 1008 4 6292
localization 8.0172E-4 4 1060 4 6292
macromolecule localization 9.5079E-4 4 397 3 6292
protein amino acid phosphorylation 1.5586E-3 4 103 2 6292
intracellular signal transduction 1.9399E-3 4 115 2 6292
intracellular signaling pathway 3.0282E-3 4 144 2 6292
phosphoinositide phosphorylation 3.1756E-3 4 5 1 6292
lipid phosphorylation 3.1756E-3 4 5 1 6292
phosphorylation 4.6503E-3 4 179 2 6292
signaling pathway 4.9092E-3 4 184 2 6292
signal transduction 6.6027E-3 4 214 2 6292
signal transmission 6.7852E-3 4 217 2 6292
signaling process 6.7852E-3 4 217 2 6292
phosphorus metabolic process 7.5386E-3 4 229 2 6292
phosphate metabolic process 7.5386E-3 4 229 2 6292
protein retention in Golgi apparatus 8.2408E-3 4 13 1 6292
protein localization in Golgi apparatus 8.2408E-3 4 13 1 6292
signaling 9.0872E-3 4 252 2 6292
vacuole inheritance 9.5041E-3 4 15 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

1-phosphatidylinositol-3-kinase activity 2.5411E-3 4 4 1 6292
phosphoinositide 3-kinase activity 3.1756E-3 4 5 1 6292
protein kinase activity 3.5467E-3 4 156 2 6292
phosphotransferase activity, alcohol group as acceptor 5.6697E-3 4 198 2 6292
lipid kinase activity 6.3436E-3 4 10 1 6292
inositol or phosphatidylinositol kinase activity 6.9763E-3 4 11 1 6292
kinase activity 7.0945E-3 4 222 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle