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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

retromer complex 4.8197E-10 3 6 3 6292
endosome 3.2303E-6 3 94 3 6292
endomembrane system 2.5131E-4 3 398 3 6292
membrane part 1.16E-3 3 662 3 6292
protein complex 5.8881E-3 3 1137 3 6292
membrane 6.8885E-3 3 1198 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

retrograde transport, endosome to Golgi 2.3352E-8 3 19 3 6292
endosome transport 5.3258E-7 3 52 3 6292
protein retention in Golgi apparatus 1.1809E-5 3 13 2 6292
protein localization in Golgi apparatus 1.1809E-5 3 13 2 6292
maintenance of protein location in cell 4.5363E-5 3 25 2 6292
maintenance of protein location 4.9138E-5 3 26 2 6292
maintenance of location in cell 5.3064E-5 3 27 2 6292
maintenance of location 5.7139E-5 3 28 2 6292
vesicle-mediated transport 1.5647E-4 3 340 3 6292
intracellular transport 6.7555E-4 3 553 3 6292
establishment of localization in cell 8.589E-4 3 599 3 6292
cellular localization 1.0628E-3 3 643 3 6292
protein localization in organelle 1.6453E-3 3 149 2 6292
transport 3.9684E-3 3 997 3 6292
establishment of localization 4.1014E-3 3 1008 3 6292
localization 4.7701E-3 3 1060 3 6292
cellular protein localization 5.5058E-3 3 274 2 6292
cellular macromolecule localization 5.9093E-3 3 284 2 6292
protein localization 6.714E-3 3 303 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein transporter activity 7.4359E-7 3 58 3 6292
substrate-specific transporter activity 1.51E-4 3 336 3 6292
transporter activity 2.6288E-4 3 404 3 6292
phosphatidylinositol-3-phosphate binding 9.0332E-3 3 19 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle