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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

THO complex 5.3646E-13 7 4 4 6292
nuclear part 5.0081E-6 7 1103 7 6292
transcription export complex 6.3596E-6 7 4 2 6292
macromolecular complex 7.9244E-5 7 1635 7 6292
protein complex 2.0393E-4 7 1137 6 6292
nucleus 3.7528E-4 7 2041 7 6292
organelle part 8.2061E-4 7 2282 7 6292
intracellular organelle part 8.2061E-4 7 2282 7 6292
heterogeneous nuclear ribonucleoprotein complex 3.3344E-3 7 3 1 6292
Cdc73/Paf1 complex 8.8705E-3 7 8 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mRNA transport 1.2557E-14 7 68 7 6292
mRNA export from nucleus 1.2557E-14 7 68 7 6292
RNA export from nucleus 4.1147E-14 7 80 7 6292
RNA transport 4.5039E-14 7 81 7 6292
nucleic acid transport 4.5039E-14 7 81 7 6292
establishment of RNA localization 4.5039E-14 7 81 7 6292
RNA localization 1.1347E-13 7 92 7 6292
nucleobase, nucleoside, nucleotide and nucleic acid transport 1.5439E-13 7 96 7 6292
nuclear export 2.5664E-13 7 103 7 6292
nuclear transport 1.3683E-12 7 130 7 6292
nucleocytoplasmic transport 1.3683E-12 7 130 7 6292
macromolecule localization 3.7876E-9 7 397 7 6292
intracellular transport 3.9124E-8 7 553 7 6292
RNA elongation from RNA polymerase II promoter 4.3538E-8 7 39 4 6292
establishment of localization in cell 6.8649E-8 7 599 7 6292
RNA elongation 7.8686E-8 7 45 4 6292
cellular localization 1.1302E-7 7 643 7 6292
transport 2.4639E-6 7 997 7 6292
establishment of localization 2.6612E-6 7 1008 7 6292
DNA recombination 3.4316E-6 7 114 4 6292
localization 3.7883E-6 7 1060 7 6292
transcription, DNA-dependent 5.8734E-5 7 503 5 6292
RNA biosynthetic process 6.1637E-5 7 508 5 6292
transcription 9.2357E-5 7 552 5 6292
transcription from RNA polymerase II promoter 2.4308E-4 7 335 4 6292
RNA metabolic process 1.2754E-3 7 954 5 6292
DNA metabolic process 2.0595E-3 7 585 4 6292
anatomical structure homeostasis 2.8379E-3 7 286 3 6292
telomere organization 2.8379E-3 7 286 3 6292
telomere maintenance 2.8379E-3 7 286 3 6292
cellular macromolecule biosynthetic process 3.5479E-3 7 1187 5 6292
macromolecule biosynthetic process 3.5757E-3 7 1189 5 6292
gene expression 5.0816E-3 7 1283 5 6292
poly(A)+ mRNA export from nucleus 7.7654E-3 7 7 1 6292
homeostatic process 7.7826E-3 7 408 3 6292
nucleic acid metabolic process 7.9545E-3 7 1415 5 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleic acid binding 8.7797E-6 7 666 6 6292
binding 4.326E-4 7 1294 6 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle