| From Publication: | Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22. |
| Notes: | From the published set of protein complexes (core proteins only) |
| Complex Size: | 4 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| mRNA cleavage factor complex | 7.4262E-11 | 4 | 20 | 4 | 6292 |
| nucleoplasm part | 2.2451E-6 | 4 | 245 | 4 | 6292 |
| nucleoplasm | 3.0322E-6 | 4 | 264 | 4 | 6292 |
| nuclear lumen | 2.6539E-5 | 4 | 453 | 4 | 6292 |
| organelle lumen | 1.2008E-4 | 4 | 660 | 4 | 6292 |
| intracellular organelle lumen | 1.2008E-4 | 4 | 660 | 4 | 6292 |
| membrane-enclosed lumen | 1.5203E-4 | 4 | 700 | 4 | 6292 |
| nuclear part | 9.4015E-4 | 4 | 1103 | 4 | 6292 |
| protein complex | 1.0617E-3 | 4 | 1137 | 4 | 6292 |
| macromolecular complex | 4.5471E-3 | 4 | 1635 | 4 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| mRNA polyadenylation | 5.9409E-11 | 4 | 19 | 4 | 6292 |
| mRNA cleavage | 1.9389E-10 | 4 | 25 | 4 | 6292 |
| RNA polyadenylation | 2.2915E-10 | 4 | 26 | 4 | 6292 |
| mRNA 3'-end processing | 4.8228E-10 | 4 | 31 | 4 | 6292 |
| RNA 3'-end processing | 1.7156E-9 | 4 | 42 | 4 | 6292 |
| nucleic acid phosphodiester bond hydrolysis | 2.5012E-9 | 4 | 46 | 4 | 6292 |
| mRNA processing | 3.6385E-7 | 4 | 156 | 4 | 6292 |
| mRNA metabolic process | 1.2778E-6 | 4 | 213 | 4 | 6292 |
| RNA processing | 1.3107E-5 | 4 | 380 | 4 | 6292 |
| RNA metabolic process | 5.2568E-4 | 4 | 954 | 4 | 6292 |
| gene expression | 1.7224E-3 | 4 | 1283 | 4 | 6292 |
| nucleic acid metabolic process | 2.5494E-3 | 4 | 1415 | 4 | 6292 |
| nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | 3.8261E-3 | 4 | 1566 | 4 | 6292 |
| cellular nitrogen compound metabolic process | 6.2471E-3 | 4 | 1770 | 4 | 6292 |
| nitrogen compound metabolic process | 6.5492E-3 | 4 | 1791 | 4 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| protein heterodimerization activity | 1.8182E-6 | 4 | 4 | 2 | 6292 |
| protein dimerization activity | 4.5436E-6 | 4 | 6 | 2 | 6292 |
| RNA binding | 7.5347E-4 | 4 | 367 | 3 | 6292 |
| binding | 1.7823E-3 | 4 | 1294 | 4 | 6292 |
| protein binding | 3.3984E-3 | 4 | 612 | 3 | 6292 |
| nucleic acid binding | 4.351E-3 | 4 | 666 | 3 | 6292 |