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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 6 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

U4/U6 x U5 tri-snRNP complex 1.054E-14 6 32 6 6292
small nuclear ribonucleoprotein complex 7.9031E-13 6 63 6 6292
ribonucleoprotein complex 2.8931E-7 6 514 6 6292
nuclear part 2.8697E-5 6 1103 6 6292
macromolecular complex 3.0579E-4 6 1635 6 6292
nucleus 1.1592E-3 6 2041 6 6292
organelle part 2.2664E-3 6 2282 6 6292
intracellular organelle part 2.2664E-3 6 2282 6 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nuclear mRNA splicing, via spliceosome 1.3033E-11 6 99 6 6292
RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 1.3865E-11 6 100 6 6292
RNA splicing, via transesterification reactions 2.1021E-11 6 107 6 6292
RNA splicing 7.6154E-11 6 132 6 6292
mRNA processing 2.1125E-10 6 156 6 6292
mRNA metabolic process 1.4052E-9 6 213 6 6292
RNA processing 4.675E-8 6 380 6 6292
RNA metabolic process 1.1988E-5 6 954 6 6292
gene expression 7.1216E-5 6 1283 6 6292
nucleic acid metabolic process 1.283E-4 6 1415 6 6292
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 2.3599E-4 6 1566 6 6292
cellular nitrogen compound metabolic process 4.9256E-4 6 1770 6 6292
nitrogen compound metabolic process 5.2873E-4 6 1791 6 6292
cellular macromolecule metabolic process 2.2844E-3 6 2285 6 6292
macromolecule metabolic process 2.6967E-3 6 2349 6 6292
generation of catalytic spliceosome for first transesterification step 2.8585E-3 6 3 1 6292
spliceosomal conformational changes to generate catalytic conformation 8.5551E-3 6 9 1 6292
primary metabolic process 9.4808E-3 6 2896 6 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle