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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

pentose-phosphate shunt, oxidative branch 2.2727E-6 3 6 2 6292
pentose-phosphate shunt 9.9937E-6 3 12 2 6292
pentose metabolic process 1.1809E-5 3 13 2 6292
NADPH regeneration 1.5894E-5 3 15 2 6292
NADP metabolic process 2.3152E-5 3 18 2 6292
nicotinamide nucleotide metabolic process 1.3628E-4 3 43 2 6292
glucose catabolic process 1.4276E-4 3 44 2 6292
pyridine nucleotide metabolic process 1.5615E-4 3 46 2 6292
hexose catabolic process 1.7737E-4 3 49 2 6292
monosaccharide catabolic process 2.1572E-4 3 54 2 6292
alcohol catabolic process 2.4051E-4 3 57 2 6292
oxidoreduction coenzyme metabolic process 2.5779E-4 3 59 2 6292
cellular carbohydrate catabolic process 3.8456E-4 3 72 2 6292
carbohydrate catabolic process 4.1738E-4 3 75 2 6292
glucose metabolic process 8.8208E-4 3 109 2 6292
coenzyme metabolic process 1.0687E-3 3 120 2 6292
hexose metabolic process 1.141E-3 3 124 2 6292
small molecule catabolic process 1.1594E-3 3 125 2 6292
nucleotide metabolic process 1.2156E-3 3 128 2 6292
nucleoside phosphate metabolic process 1.2156E-3 3 128 2 6292
monosaccharide metabolic process 1.3517E-3 3 135 2 6292
small molecule metabolic process 1.7562E-3 3 760 3 6292
cofactor metabolic process 1.757E-3 3 154 2 6292
nucleobase, nucleoside and nucleotide metabolic process 1.8258E-3 3 157 2 6292
alcohol metabolic process 3.5672E-3 3 220 2 6292
cellular carbohydrate metabolic process 5.0399E-3 3 262 2 6292
carbohydrate metabolic process 5.7868E-3 3 281 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

phosphogluconate dehydrogenase (decarboxylating) activity 1.5158E-7 3 2 2 6292
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 3.9536E-4 3 73 2 6292
oxidoreductase activity, acting on CH-OH group of donors 4.8701E-4 3 81 2 6292
aromatic-amino-acid:2-oxoglutarate aminotransferase activity 9.5344E-4 3 2 1 6292
oxidoreductase activity 5.7868E-3 3 281 2 6292
transferase activity, transferring nitrogenous groups 8.5592E-3 3 18 1 6292
transaminase activity 8.5592E-3 3 18 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle