YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Sec62/Sec63 complex 2.4099E-10 3 5 3 6292
endoplasmic reticulum Sec complex 2.4099E-10 3 5 3 6292
rough endoplasmic reticulum 5.3017E-9 3 12 3 6292
rough endoplasmic reticulum membrane 5.3017E-9 3 12 3 6292
endoplasmic reticulum membrane 9.2371E-6 3 133 3 6292
endoplasmic reticulum part 1.3286E-5 3 150 3 6292
subsynaptic reticulum 1.3286E-5 3 150 3 6292
nuclear membrane-endoplasmic reticulum network 4.9507E-5 3 232 3 6292
endoplasmic reticulum 1.9211E-4 3 364 3 6292
endomembrane system 2.5131E-4 3 398 3 6292
membrane part 1.16E-3 3 662 3 6292
organelle membrane 1.3252E-3 3 692 3 6292
protein complex 5.8881E-3 3 1137 3 6292
membrane 6.8885E-3 3 1198 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

posttranslational protein targeting to membrane 2.0243E-9 3 9 3 6292
protein targeting to ER 1.3148E-7 3 33 3 6292
protein localization in endoplasmic reticulum 2.3809E-7 3 40 3 6292
protein targeting to membrane 5.3258E-7 3 52 3 6292
protein localization in organelle 1.302E-5 3 149 3 6292
protein targeting 5.1461E-5 3 235 3 6292
intracellular protein transport 6.5817E-5 3 255 3 6292
protein transport 7.7311E-5 3 269 3 6292
establishment of protein localization 7.9054E-5 3 271 3 6292
cellular protein localization 8.1719E-5 3 274 3 6292
cellular macromolecule localization 9.1032E-5 3 284 3 6292
protein localization 1.1063E-4 3 303 3 6292
macromolecule localization 2.4942E-4 3 397 3 6292
cytosol to ER transport 4.768E-4 3 1 1 6292
intracellular transport 6.7555E-4 3 553 3 6292
establishment of localization in cell 8.589E-4 3 599 3 6292
cellular localization 1.0628E-3 3 643 3 6292
transport 3.9684E-3 3 997 3 6292
establishment of localization 4.1014E-3 3 1008 3 6292
localization 4.7701E-3 3 1060 3 6292
SRP-dependent cotranslational protein targeting to membrane 9.9809E-3 3 21 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein transporter activity 7.4359E-7 3 58 3 6292
substrate-specific transporter activity 1.51E-4 3 336 3 6292
transporter activity 2.6288E-4 3 404 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle