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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ESCRT I complex 2.2991E-13 4 6 4 6292
endosomal part 1.3572E-10 4 23 4 6292
endosome membrane 1.3572E-10 4 23 4 6292
endosome 4.6741E-8 4 94 4 6292
membrane part 1.2155E-4 4 662 4 6292
organelle membrane 1.4518E-4 4 692 4 6292
protein complex 1.0617E-3 4 1137 4 6292
membrane 1.3089E-3 4 1198 4 6292
macromolecular complex 4.5471E-3 4 1635 4 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein targeting to vacuole 1.3251E-8 4 69 4 6292
ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway 7.8517E-8 4 18 3 6292
vacuolar transport 1.0596E-7 4 115 4 6292
protein targeting 1.8984E-6 4 235 4 6292
protein targeting to membrane 2.1179E-6 4 52 3 6292
intracellular protein transport 2.6373E-6 4 255 4 6292
protein transport 3.2699E-6 4 269 4 6292
establishment of protein localization 3.3688E-6 4 271 4 6292
cellular protein localization 3.5214E-6 4 274 4 6292
cellular macromolecule localization 4.0674E-6 4 284 4 6292
protein localization 5.2771E-6 4 303 4 6292
macromolecule localization 1.5626E-5 4 397 4 6292
modification-dependent protein catabolic process 5.8733E-5 4 156 3 6292
ubiquitin-dependent protein catabolic process 5.8733E-5 4 156 3 6292
intracellular transport 5.908E-5 4 553 4 6292
proteolysis involved in cellular protein catabolic process 6.2187E-5 4 159 3 6292
modification-dependent macromolecule catabolic process 6.8238E-5 4 164 3 6292
cellular protein catabolic process 7.7347E-5 4 171 3 6292
establishment of localization in cell 8.1397E-5 4 599 4 6292
proteolysis 1.0274E-4 4 188 3 6292
protein catabolic process 1.0438E-4 4 189 3 6292
cellular localization 1.0815E-4 4 643 4 6292
cellular macromolecule catabolic process 2.8637E-4 4 265 3 6292
macromolecule catabolic process 3.9009E-4 4 294 3 6292
transport 6.2722E-4 4 997 4 6292
establishment of localization 6.5541E-4 4 1008 4 6292
localization 8.0172E-4 4 1060 4 6292
cellular catabolic process 1.084E-3 4 415 3 6292
catabolic process 1.834E-3 4 496 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein binding 3.3984E-3 4 612 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle